E-GEOD-10054.raw.1	Transcription profiling of rice in splicing factor OsSKIPa knock-down and overexpressed rice
E-GEOD-10373.raw.1	Transcription profiling of rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
E-GEOD-10373.raw.2	Transcription profiling of rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
E-GEOD-10857.raw.1	Transcription profiling of rice root tips before, at and buckled by a hard layer in two rice varieties
E-GEOD-11025.raw.1	Transcription profiling of rice genotypes in response to rice stripe virus infection
E-GEOD-11175.raw.1	Comparison of transcriptome profile between wild-type and dst mutant plants
E-GEOD-11966.raw.1	Transcription profiling of rice embryo,endosperm,root,leaf and seedling
E-GEOD-12069.raw.1	Transcription profiling of rice reveals plant mutagenesis may induce more transcriptomic changes than transgene insertion
E-GEOD-13735.raw.1	Expression data from rice genotypes FL478 and IR29
E-GEOD-13988.raw.1	Rice expression atlas (1): Anther development
E-GEOD-14275.raw.1	Transcription profiling of rice seedlings after heat shock
E-GEOD-14298.raw.1	Rice expression atlas (2): Pollination - Fertilization
E-GEOD-14299.raw.1	Rice expression atlas (3): Early embryogenesis
E-GEOD-14300.raw.1	Rice expression atlas (4): Vegetative tissues
E-GEOD-14304.raw.1	Rice expression atlas: Plant reproductive process
E-GEOD-14304.raw.2	Rice expression atlas: Plant reproductive process
E-GEOD-14304.raw.3	Rice expression atlas: Plant reproductive process
E-GEOD-14304.raw.4	Rice expression atlas: Plant reproductive process
E-GEOD-14647.raw.1	Gene expression in leaf blades of the rice Os-LBD37 overexpressor line RK16331-13
E-GEOD-14692.raw.1	Temporal regulatory role of miR156 during leaf ontogenesis
E-GEOD-15046.raw.1	Transcriptome analysis of gibberellin-signaling mutants in rice
E-GEOD-15912.raw.1	Whole genome transcriptome profiling of Pusa 1266 and Pusa Basmati 1 in panicle primordia stage
E-GEOD-16640.raw.1	Expression analysis of genes in the lamina joint of lc1 mutant compared with that of wild-type
E-GEOD-16793.raw.1	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
E-GEOD-16793.raw.2	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
E-GEOD-17002.raw.1	Gene expression in mature pollen and sperm cells versus young seedling as a vegetative sporophyte reference control
E-GEOD-17194.raw.1	Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
E-GEOD-18361.raw.1	Transcription profiling of rice cv. Nipponbare roots infected with Magnaporthe oryzae strain Guy11
E-GEOD-18529.raw.1	Expression comparasion of rice seedlings of Osabl1 mutant and WT under ABA treatment										
E-GEOD-18930.raw.1	Microarray data from aerial tissue of submergence tolerant M202(Sub1) and intolerant M202
E-GEOD-19844.raw.1	affy_xoo_rice-Transcriptomics-based identification of Xoo strain BAI3 Talc targets in rice
E-GEOD-20522.raw.1	Genome-wide gene expression of rice cultivar Gui-630 (Indica) X Taiwanjing (Japonica) and mutant lemmata (lem) panicle
E-GEOD-21651.raw.1	Differential expression for salt and drought stress
E-GEOD-21772.raw.1	affy_meloidogyne_rice2-Oryza sativa genes expressed in the early compatible interaction with root-knot nematode
E-GEOD-21919.raw.1	Oryza sativa genes expressed in the early compatible interaction with root-knot nematode (affy_meloidogyne_rice)
E-GEOD-22538.raw.1	Differential expression for rice-gall midge interaction
E-GEOD-22788.raw.1	Rice leaf transcriptome from 6 week old plants
E-GEOD-23211.raw.1	Expression data from PSARK::IPT and wildtype rice plants
E-GEOD-24048.raw.1	Expression data from field droughted rice plants
E-GEOD-25073.raw.1	Expression data from rice seedlings of wild type and the CHR729 mutant
E-GEOD-25693.raw.1	Comparsion of gene expression profile in polaris (pola) mutant lines and its POLARIS (POLA) wild-type at meiotic and ripening stages
E-GEOD-26280.raw.1	Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice
E-GEOD-26387.raw.1	Methanol is an endogenous elicitor molecule upon senescence of detached rice leaves
E-GEOD-26840.raw.1	Express data from rice endosperm
E-GEOD-27064.raw.1	Rice endosperm: mRNA profiling and H3K27me3 occupancy
E-GEOD-27856.raw.1	Expression data from rice embryo and endosperm development
E-GEOD-28012.raw.1	Whole-Genome Analysis of SSB Larvae Infestation Regulated Rice Genes
E-GEOD-28124.raw.1	Transcriptome Phase Distribution Analysis Reveals Diurnal Regulated Biological Processes and Key Pathways in Rice Flag Leaves and Seedling Leaves
E-GEOD-28209.raw.1	Expression data from transgenic rice with anti-OsPDCD5
E-GEOD-28308.raw.1	A single functional blast resistance gene Pi54 activates complex defense mechanism in Rice
E-GEOD-29349.raw.1	Microarray data of genome-wide gene expression profile in osmads6-1
E-GEOD-29577.raw.1	Global gene expression profiles of Oryza sativa wild type Nipponbare and mutant coi1-13
E-GEOD-29820.raw.1	Comparative Transcriptomes Profiling of Photoperiod-sensitive Male Sterile Rice Nongken 58S between Short Day and Long Day Condition
E-GEOD-29967.raw.1	Expression data from rice after brown planthopper attack
E-GEOD-30487.raw.1	Expression profile of high yielding rice introgression line
E-GEOD-30583.raw.1	Expression data from rice leaves treated or not with fungal elicitors and high-throughput pyrosequencing of endogenous small RNAs from Oryza sativa
E-GEOD-30818.raw.1	Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice
E-GEOD-30941.raw.1	Rice gene global expression analysis upon inoculation with different Magnaporthe isolates
E-GEOD-30942.raw.1	Rice gene global expression during nonhost interaction with Blumeria graminis f. sp. hordei (Bgh)
E-GEOD-31077.raw.1	Expression data from rice seeds during low temperature treatment
E-GEOD-31834.raw.1	Expression data from shoot bases of rice seedling after gravistimulation
E-GEOD-33203.raw.1	DNA microarray data from transgenic rice KMD and its parent XS11
E-GEOD-33204.raw.1	DNA microarray data from transgenic rice Huahui 1 (HH1) and its parent Minghui 63 (MH63)
E-GEOD-33204.raw.2	DNA microarray data from transgenic rice Huahui 1 (HH1) and its parent Minghui 63 (MH63)
E-GEOD-33361.raw.1	Genome-wide gene expression profiling of rice Zhonghua11 and ila1 lamina joint
E-GEOD-33411.raw.1	Resistance gene-dependent responses in rice to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae
E-GEOD-33411.raw.2	Resistance gene-dependent responses in rice to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae
E-GEOD-33441.raw.1	Expression data from cynosure (cyn) mutant and its CYNOSURE (CYN) wild-type at before flowering and 5 days after pollination stage
E-GEOD-34192.raw.1	affy_riz_2011_7-: Transcriptomic analysis of rice leaves challenged with virulent and avirulent Xoo strains
E-GEOD-34547.raw.1	Expression data of the Dongjin and osbzip58-1 mutants in the immature endosperm at 9 DAF
E-GEOD-35630.raw.1	GATA Transcription Factor (CGA1) Regulates Chloroplast Development in Rice
E-GEOD-35984.raw.1	Expression data of one-week-old rice seedlings exposed to Pi-deficient solution for 6, 24, 48, 72 hours
E-GEOD-36093.raw.1	Expression data from infected (Xanthomonas oryzae pv. Oryzae (P10)) leaf in japonica rice (cv. Y73)
E-GEOD-36272.raw.1	Comparison of transcriptional responses of two susceptible rice cultivars to strains of Xanthomonas oryzae
E-GEOD-36272.raw.2	Comparison of transcriptional responses of two susceptible rice cultivars to strains of Xanthomonas oryzae
E-GEOD-36320.raw.1	Transcriptomes of transgenic rice expressing a constitutively active phytochrome OsPHYB-Y283H (OsYHB) allele
E-GEOD-36661.raw.1	Transcriptome analysis of hrf1 transformed rice revealed crosstalk between disease resistance and drought tolerance mediated by Harpin
E-GEOD-37557.raw.1	Gene expression analysis in response to various hormone treatments
E-GEOD-37940.raw.1	Genome-wide Gene Expression Profiling Associated with Seedling Cold Tolerance Improvement in Japonica Rice Background
E-GEOD-38023.raw.1	Comparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes
E-GEOD-38871.raw.1	Expression data from IR64 rice transformed with 35S::OsPSTOL1 gene
E-GEOD-39298.raw.1	Comparison of transcriptome profile between wild-type and Epi-df mutant plants
E-GEOD-39687.raw.1	Nitrogen-efficient rice over-expressing alanine aminotransferase
E-GEOD-39687.raw.2	Nitrogen-efficient rice over-expressing alanine aminotransferase
E-GEOD-39767.raw.1	Expression data from OsRP1L1-overexpressing plant leaf in japonica rice (cv. Ishikari-shiroge (I-S))
E-GEOD-40242.raw.1	Activating of jasmonic acid pathway through depletion of rice hydroperoxide lyase OsHPL3 revealed a crosstalk between HPL- and AOS-branch oxylipin pathways in rice
E-GEOD-41097.raw.1	Comparison of transcriptome profile between wild-type and dao mutant plants
E-GEOD-41103.raw.1	Rice Submergence Stress Response
E-GEOD-41556.raw.1	Expression data from rice organs at the reproductive stage
E-GEOD-41798.raw.1	Transcriptome study of rice early response to rice blast fungus
E-GEOD-42028.raw.1	Overexpression of OsMADS29 in Oryza sativa var. PB1
E-GEOD-42029.raw.1	Silencing of OsMADS29 in Oryza sativa var. PB1
E-GEOD-42683.raw.1	Expression analysis of genes affected by dehydration-responsive transcription factor Os02g31890 from rice.
E-GEOD-43050.raw.1	Expression data in response to Xoo. bacterial infection in rice
E-GEOD-43780.raw.1	affy_compartimentation_rice_albumen_embryon-Transcriptomic study of the rice seed compartimentation during germination
E-GEOD-45724.raw.1	Microarray analysis of transcriptional responses to alkali stress in two rice genotypes
E-GEOD-45751.raw.1	Identification of rice ethylene-response mutants and characterization of MHZ7 in distinct ethylene response and yield trait regulation
E-GEOD-46086.raw.1	DNA microarray data from root of transgenic rice Huahui 1 (HH1) and its parent Minghui 63 (MH63)
E-GEOD-46173.raw.1	Expression profiling of OsEREBP1-ox plants
E-GEOD-46334.raw.1	ovation-Transcriptomic study of rice seed ageing
E-GEOD-46342.raw.1	ivt-Transcriptomic study of rice seed ageing
E-GEOD-46616.raw.1	Expression data from OsEBS-transgenic rice B10201 and B10301 and control Guichao2
E-GEOD-46867.raw.1	Molecular interaction between PHO2 and GIGANTEA reveals a new crosstalk between flowering time and Pi homeostasis in rice
E-GEOD-47195.raw.1	SALT-RESPONSIVE ERF1 expression profiling in rice roots
E-GEOD-47812.raw.1	Gene expression data for rice grain (Oryza sativa L.) aroma performed using bulk pools of aromatic and non-aromatic RILs derived from a cross between Pusa 1121 and Pusa 1342
E-GEOD-48069.raw.1	OsJMJ705 preferentially activates stress-responsive genes
E-GEOD-48549.raw.1	Nitrogen-efficient rice over-expressing alanine aminotransferase at three different N concentrations
E-GEOD-48549.raw.2	Nitrogen-efficient rice over-expressing alanine aminotransferase at three different N concentrations
E-GEOD-48549.raw.3	Nitrogen-efficient rice over-expressing alanine aminotransferase at three different N concentrations
E-GEOD-49020.raw.1	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49020.raw.2	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49020.raw.3	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49020.raw.4	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49020.raw.5	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49020.raw.6	A global analysis of QTLs for expression variations in rice flag leaf at heading date
E-GEOD-49818.raw.1	Expression data from additional fertilization rice seeds
E-GEOD-51151.raw.1	Expression data from OsSIK2-overexpression and mutant rice seedlings
E-GEOD-51152.raw.1	Identification of rice ethylene-response mutants and characterization of mhz2 and mhz8 in distinct ethylene response and yield trait regulation
E-GEOD-51153.raw.1	Identification of rice ethylene-response mutants and characterization of mhz1, mhz4 and mhz5 in distinct ethylene response and yield trait regulation
E-GEOD-51616.raw.1	Ghd7 is a central regulator for growth, development, adaptation and responses to biotic and abiotic stresses
E-GEOD-5167.raw.1	Transcription profiling of rice seedlings after hormone treatment
E-GEOD-53858.raw.1	Serious leaf damage caused by Osslac7 mutation arouses self-protection mechanism in rice
E-GEOD-54243.raw.1	Expression data from rice plants showing hybrid weakness syndrome
E-GEOD-55902.raw.1	Expression data from Rice leaves
E-GEOD-56779.raw.1	Expression data from rice meiosis-stage young inflorescences						
E-GEOD-58007.raw.1	Microarray for Osrdr1 mutant
E-GEOD-60823.raw.1	Expression data from +Pi and -Pi treeatment between WT and spx1spx2 double mutant
E-GEOD-61952.raw.1	Expression data from rice lesion mimic mutant spotted leaf 5 (spl5)
E-GEOD-62078.raw.1	Expression data from rice panicles of osmads1 mutant and wild type
E-GEOD-62308.raw.1	Expression data from ABA up-regulated rice under drought stress
E-GEOD-6893.raw.1	Transcription profiling of rice reproductive development
E-GEOD-6893.raw.2	Transcription profiling of rice reproductive development
E-GEOD-6901.raw.1	Transcription profiling of rice seedlings after stress treatment
E-GEOD-69010.raw.1	Expression data from -Pi treatment between WT, phr1, phr3 and phr1phr2phr3 triple mutant
E-GEOD-7256.raw.1	Transcription profiling of rice to identify genes differentially expressed upon virulent infection by Magnaporthe grisea
E-GEOD-7951.raw.1	Transcription profiling of rice stigma
E-GEOD-8216.raw.1	Transcriptional profiling of Cellulase induced hypersensitive reaction like response in rice
E-GEOD-8380.raw.1	Transcription profiling of rice plants overexpressing OsWRKY13
E-GEOD-9498.raw.1	Transcription profiling of rice wild type Zhonghua11 and mutant gif1 in filling stage
E-MEXP-1766.raw.1	Transcription profiling of rice over the first 24 hours of germination under aerobic conditions
E-MEXP-2267.raw.1	Transcription profiling time course of rice germination under anaerobic conditions, aerobic to anaerobic switch and anaerobic to aerobic switch
E-MEXP-2506.raw.1	Transcription profiling of rice plants grown in different light and temperature cycles
E-MEXP-2506.raw.2	Transcription profiling of rice plants grown in different light and temperature cycles
E-MTAB-275.raw.1	Transcription profiling by array of rice plants grown in different light and temperature conditions
E-MTAB-397.raw.1	Transcription profiling of grain filling rice caryopses