[←][→] vvi   VIT_00022843001 Gene
functional annotation
Function   serine hydroxymethyltransferase 7  
GO BP
GO CC
GO MF
KEGG vvi00260 [list] [network] Glycine, serine and threonine metabolism (67 genes)
vvi00460 [list] [network] Cyanoamino acid metabolism (69 genes)
vvi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (77 genes)
vvi00670 [list] [network] One carbon pool by folate (20 genes)
vvi01200 [list] [network] Carbon metabolism (263 genes)
vvi01230 [list] [network] Biosynthesis of amino acids (226 genes)
Protein XP_002266312.1 
BLAST XP_002266312.1 
Orthologous [Ortholog page] SHM6 (ath)  SHM7 (ath)  LOC4324773 (osa)  LOC4338868 (osa)  LOC11420162 (mtr)  LOC11424199 (mtr)  LOC100191532 (zma)  LOC100267713 (vvi)  LOC100286146 (zma)  LOC100776419 (gma)  LOC100793208 (gma)  LOC100799472 (gma)  LOC100810926 (gma)  LOC101250548 (sly)  LOC103833575 (bra)  LOC103869084 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  plas 1  (predict for XP_002266312.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_002266312.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03040 Spliceosome 2
vvi00260 Glycine, serine and threonine metabolism 2
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
Genes directly connected with LOC100241225 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 LOC100245730 transcriptional repressor ILP1 [detail] 100245730
6.0 LOC100264171 protein SMG7 [detail] 100264171
5.9 LOC100242447 eukaryotic translation initiation factor 4B2 [detail] 100242447
5.7 LOC100267713 serine hydroxymethyltransferase 7 [detail] 100267713
5.4 LOC100855233 acidic leucine-rich nuclear phosphoprotein 32-related protein [detail] 100855233
5.3 LOC100243282 protein RTF2 homolog [detail] 100243282
4.9 LOC100244278 BSD domain-containing protein 1 [detail] 100244278
4.5 LOC100246523 probable enoyl-CoA hydratase 1, peroxisomal [detail] 100246523
Coexpressed
gene list		 [Coexpressed gene list for LOC100241225]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100241225      
Refseq ID (protein) XP_002266312.1 


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