[][] vvi   VIT_00031709001 Gene
functional annotation
Function   polyadenylate-binding protein 2-like
GO BP
GO CC
GO MF
KEGG vvi03013 [list] [network] RNA transport (161 genes)
vvi03015 [list] [network] mRNA surveillance pathway (110 genes)
vvi03018 [list] [network] RNA degradation (104 genes)
Protein XP_002285190.1  XP_019074521.1 
BLAST XP_002285190.1  XP_019074521.1 
Orthologous [Ortholog page] PAB4 (ath)PAB2 (ath)PAB3 (ath)PAB8 (ath)PAB5 (ath)LOC4336331 (osa)LOC4341408 (osa)LOC4345242 (osa)LOC4346409 (osa)LOC7467793 (ppo)LOC7490046 (ppo)LOC7492048 (ppo)LOC7492495 (ppo)LOC11419187 (mtr)LOC11429679 (mtr)LOC11445084 (mtr)LOC25485028 (mtr)LOC25496270 (mtr)LOC100255846 (vvi)LOC100262903 (vvi)LOC100263065 (vvi)LOC100285420 (zma)LOC100381531 (zma)LOC100383542 (zma)LOC100502035 (zma)LOC100778879 (gma)LOC100780329 (gma)LOC100783163 (gma)LOC100784442 (gma)LOC100798998 (gma)LOC100808877 (gma)LOC100811385 (gma)LOC100813735 (gma)LOC101258105 (sly)LOC101261596 (sly)LOC101264108 (sly)LOC103641822 (zma)LOC103830833 (bra)LOC103831686 (bra)LOC103834441 (bra)LOC103835691 (bra)LOC103842244 (bra)LOC103842418 (bra)LOC103844362 (bra)LOC103860422 (bra)LOC103871402 (bra)
Subcellular
localization
wolf
pero 4,  cyto 3,  chlo 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002285190.1)
pero 4,  cyto 3,  chlo 1,  nucl 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_019074521.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002285190.1)
other 6  (predict for XP_019074521.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03013 RNA transport 3
vvi03015 mRNA surveillance pathway 3
vvi03018 RNA degradation 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with LOC100241923 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.0 LOC100255846 polyadenylate-binding protein 2-like [detail] 100255846
6.0 LOC100258263 DEAD-box ATP-dependent RNA helicase 7 [detail] 100258263
6.0 LOC100249161 alanine--tRNA ligase [detail] 100249161
Coexpressed
gene list
[Coexpressed gene list for LOC100241923]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100241923    
Refseq ID (protein) XP_002285190.1 
XP_019074521.1 


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