[←][→] vvi   VIT_00009302001 Gene
functional annotation
Function   pre-mRNA-processing protein 40A  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_010664484.1  XP_019072118.1 
BLAST XP_010664484.1  XP_019072118.1 
Orthologous [Ortholog page] PRP40A (ath)  LOC4327802 (osa)  LOC7478673 (ppo)  LOC7478754 (ppo)  LOC7488856 (ppo)  LOC25482046 (mtr)  LOC25485314 (mtr)  LOC100777778 (gma)  LOC100796870 (gma)  LOC100806019 (gma)  LOC100819928 (gma)  LOC101256011 (sly)  LOC101267083 (sly)  LOC103651641 (zma)  LOC103651644 (zma)  LOC103849529 (bra) 
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_010664484.1)
chlo 8,  nucl 2  (predict for XP_019072118.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_010664484.1)
chlo 4  (predict for XP_019072118.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 RNA transport 3
vvi03040 Spliceosome 2
Genes directly connected with LOC100243779 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 LOC100242745 eukaryotic translation initiation factor 5B [detail] 100242745
8.4 LOC100250397 DNA helicase INO80 [detail] 100250397
8.4 LOC100254201 THO complex subunit 2 [detail] 100254201
7.7 LOC100245758 protein CROWDED NUCLEI 4 [detail] 100245758
7.5 LOC100256008 F-box-like/WD repeat-containing protein TBL1X [detail] 100256008
7.0 LOC100261404 DEAD-box ATP-dependent RNA helicase 13 [detail] 100261404
6.9 LOC100853350 sister chromatid cohesion protein PDS5 homolog B [detail] 100853350
5.2 LOC100855126 sister chromatid cohesion protein PDS5 homolog B [detail] 100855126
Coexpressed
gene list		 [Coexpressed gene list for LOC100243779]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100243779      
Refseq ID (protein) XP_010664484.1 
XP_019072118.1 


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