[←][→] vvi   VIT_00010362001 Gene
functional annotation
Function   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_002266642.1  XP_010655417.1  XP_010655421.1  XP_019077446.1  XP_019077448.1  XP_019077449.1  XP_019077453.1 
BLAST XP_002266642.1  XP_010655417.1  XP_010655421.1  XP_019077446.1  XP_019077448.1  XP_019077449.1  XP_019077453.1 
Orthologous [Ortholog page] AT1G27900 (ath)  LOC4350353 (osa)  LOC7477037 (ppo)  LOC25501723 (mtr)  LOC100793583 (gma)  LOC101264721 (sly)  LOC103638000 (zma)  LOC103835367 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1  (predict for XP_002266642.1)
nucl 4,  cyto 3,  chlo 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1  (predict for XP_010655417.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_010655421.1)
nucl 4,  cyto 3,  cysk_nucl 3  (predict for XP_019077446.1)
nucl 4,  cyto 3,  nucl_plas 3  (predict for XP_019077448.1)
cyto 4,  nucl 2,  cyto_pero 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for XP_019077449.1)
mito 4,  chlo 3,  nucl 3  (predict for XP_019077453.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002266642.1)
other 6,  chlo 4  (predict for XP_010655417.1)
other 6,  chlo 4  (predict for XP_010655421.1)
other 6,  chlo 4  (predict for XP_019077446.1)
other 6,  chlo 4  (predict for XP_019077448.1)
other 6,  chlo 4  (predict for XP_019077449.1)
mito 3  (predict for XP_019077453.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
vvi03020 RNA polymerase 3
Genes directly connected with LOC100245855 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 LOC100241130 DNA-directed RNA polymerase I subunit 2 [detail] 100241130
4.6 LOC100258308 WD repeat-containing protein 75 [detail] 100258308
4.6 LOC100242719 nucleolar protein 6 [detail] 100242719
Coexpressed
gene list		 [Coexpressed gene list for LOC100245855]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100245855      
Refseq ID (protein) XP_002266642.1 
XP_010655417.1 
XP_010655421.1 
XP_019077446.1 
XP_019077448.1 
XP_019077449.1 
XP_019077453.1 


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