[←][→] vvi   VIT_00011117001 Gene
functional annotation
Function   small nuclear ribonucleoprotein Sm D1  
GO BP
GO CC
GO MF
KEGG vvi03040 [list] [network] Spliceosome (166 genes)
Protein XP_002277211.1  XP_002277231.1  XP_010652146.1 
BLAST XP_002277211.1  XP_002277231.1  XP_010652146.1 
Orthologous [Ortholog page] AT3G07590 (ath)  LOC4329810 (osa)  LOC4336118 (osa)  LOC7480704 (ppo)  LOC11420807 (mtr)  LOC25499104 (mtr)  LOC100258386 (vvi)  LOC100281963 (zma)  LOC100284787 (zma)  LOC100286216 (zma)  LOC100778485 (gma)  LOC100792809 (gma)  LOC100793721 (gma)  LOC100819089 (gma)  LOC101248611 (sly)  LOC101251485 (sly)  LOC103849211 (bra)  LOC103858735 (bra)  LOC103859234 (bra)  LOC103870651 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  mito 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_002277211.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_002277231.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_010652146.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002277211.1)
other 6  (predict for XP_002277231.1)
other 6  (predict for XP_010652146.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
vvi03040 Spliceosome 2
Genes directly connected with LOC100256258 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 LOC100248226 40S ribosomal protein S23 [detail] 100248226
6.8 LOC100247863 ubiquitin-40S ribosomal protein S27a [detail] 100247863
6.7 LOC100247038 glycine-rich RNA-binding protein 2, mitochondrial-like [detail] 100247038
Coexpressed
gene list		 [Coexpressed gene list for LOC100256258]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100256258      
Refseq ID (protein) XP_002277211.1 
XP_002277231.1 
XP_010652146.1 


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