[←][→] ppo   POPTR_002G054800v3 Gene
functional annotation
Function   small nuclear ribonucleoprotein SmD1a  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_002302121.1 
BLAST XP_002302121.1 
Orthologous [Ortholog page] AT3G07590 (ath)  LOC4329810 (osa)  LOC4336118 (osa)  LOC11420807 (mtr)  LOC25499104 (mtr)  LOC100256258 (vvi)  LOC100258386 (vvi)  LOC100281963 (zma)  LOC100284787 (zma)  LOC100286216 (zma)  LOC100778485 (gma)  LOC100792809 (gma)  LOC100793721 (gma)  LOC100819089 (gma)  LOC101248611 (sly)  LOC101251485 (sly)  LOC103849211 (bra)  LOC103858735 (bra)  LOC103859234 (bra)  LOC103870651 (bra) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_002302121.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002302121.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03040 Spliceosome 5
ppo03013 RNA transport 2
Genes directly connected with LOC7480704 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 LOC7492248 probable small nuclear ribonucleoprotein G [detail] 7492248
8.4 LOC7490375 60S ribosomal protein L35a-1 [detail] 7490375
8.2 LOC7482403 upstream activation factor subunit spp27 [detail] 7482403
8.1 LOC7487429 nascent polypeptide-associated complex subunit beta [detail] 7487429
7.6 LOC7494696 small nuclear ribonucleoprotein SmD3b [detail] 7494696
7.3 LOC7471585 uncharacterized protein At2g34160 [detail] 7471585
6.9 LOC7465827 histone deacetylase complex subunit SAP18 [detail] 7465827
6.8 LOC7472468 sm-like protein LSM36B [detail] 7472468
6.7 LOC7470189 50S ribosomal protein L24 [detail] 7470189
6.5 LOC7463178 small ribosomal subunit protein S13, mitochondrial [detail] 7463178
6.3 LOC7495243 U1 small nuclear ribonucleoprotein A [detail] 7495243
6.0 LOC7460665 uncharacterized LOC7460665 [detail] 7460665
5.9 LOC7468466 uncharacterized LOC7468466 [detail] 7468466
5.3 LOC7497837 protein SEH1 [detail] 7497837
5.3 LOC7453577 uncharacterized LOC7453577 [detail] 7453577
Coexpressed
gene list		 [Coexpressed gene list for LOC7480704]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7480704      
Refseq ID (protein) XP_002302121.1 


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