[←][→] vvi   VIT_00026642001 Gene
functional annotation
Function   high mobility group B2 protein-like  
GO BP
GO CC
GO MF
KEGG vvi03410 [list] [network] Base excision repair (40 genes)
Protein XP_002280084.2  XP_010649446.1  XP_010649447.1  XP_019074997.1 
BLAST XP_002280084.2  XP_010649446.1  XP_010649447.1  XP_019074997.1 
Orthologous [Ortholog page] LOC542658 (zma)  LOC547975 (gma)  HMGB2 (ath)  HMGB3 (ath)  LOC4347789 (osa)  LOC7480462 (ppo)  LOC11407325 (mtr)  LOC25490320 (mtr)  LOC25501590 (mtr)  LOC100246082 (vvi)  LOC100284781 (zma)  LOC100305957 (gma)  LOC100499992 (gma)  LOC100500173 (gma)  LOC101257131 (sly)  LOC101264099 (sly)  LOC103829416 (bra)  LOC103835781 (bra)  LOC103872857 (bra)  LOC109944069 (zma) 
Subcellular
localization
wolf
nucl 10  (predict for XP_002280084.2)
nucl 10  (predict for XP_010649446.1)
nucl 10  (predict for XP_010649447.1)
nucl 10  (predict for XP_019074997.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002280084.2)
other 7  (predict for XP_010649446.1)
other 7  (predict for XP_010649447.1)
other 7  (predict for XP_019074997.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03410 Base excision repair 2
Genes directly connected with LOC100257544 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 LOC100246082 high mobility group-like [detail] 100246082
6.1 LOC100247254 retrotransposon-like protein 1 [detail] 100247254
5.7 LOC100258812 probable histone H2B.1 [detail] 100258812
4.9 LOC100853676 glycine-rich RNA-binding protein GRP2A [detail] 100853676
4.6 LOC100246768 uncharacterized LOC100246768 [detail] 100246768
4.5 LOC100256552 fidgetin-like protein 1 [detail] 100256552
3.9 LOC100262306 probable WRKY transcription factor 65 [detail] 100262306
Coexpressed
gene list		 [Coexpressed gene list for LOC100257544]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100257544      
Refseq ID (protein) XP_002280084.2 
XP_010649446.1 
XP_010649447.1 
XP_019074997.1 


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