[←][→] vvi   VIT_00037437001 Gene
functional annotation
Function   DExH-box ATP-dependent RNA helicase DExH9  
GO BP
GO CC
GO MF
KEGG vvi03018 [list] [network] RNA degradation (104 genes)
Protein XP_002273102.1  XP_010651602.1  XP_019076187.1  XP_019076188.1  XP_019076189.1 
BLAST XP_002273102.1  XP_010651602.1  XP_019076187.1  XP_019076188.1  XP_019076189.1 
Orthologous [Ortholog page] MTR4 (ath)  LOC9268439 (osa)  LOC11442551 (mtr)  LOC100804792 (gma)  LOC101257307 (sly)  LOC103638180 (zma)  LOC103829199 (bra)  LOC103838580 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for XP_002273102.1)
chlo 8,  chlo_mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_010651602.1)
cyto 4,  chlo 2,  nucl 2,  plas 1,  chlo_mito 1,  golg_plas 1  (predict for XP_019076187.1)
cyto 4,  chlo 2,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_019076188.1)
cyto 4,  chlo 2,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_019076189.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002273102.1)
other 4,  mito 3  (predict for XP_010651602.1)
other 6  (predict for XP_019076187.1)
other 6  (predict for XP_019076188.1)
other 6  (predict for XP_019076189.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 RNA transport 2
vvi03018 RNA degradation 2
vvi03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with LOC100258243 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 LOC100243553 translocase of chloroplast 159, chloroplastic [detail] 100243553
6.8 LOC100254195 uncharacterized LOC100254195 [detail] 100254195
6.5 LOC100255646 adoMet-dependent rRNA methyltransferase spb1 [detail] 100255646
6.5 LOC100248777 apoptosis inhibitor 5-like protein API5 [detail] 100248777
4.3 LOC100251669 pentatricopeptide repeat-containing protein At3g53170 [detail] 100251669
Coexpressed
gene list		 [Coexpressed gene list for LOC100258243]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100258243      
Refseq ID (protein) XP_002273102.1 
XP_010651602.1 
XP_019076187.1 
XP_019076188.1 
XP_019076189.1 


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