[←][→] vvi   VIT_00020068001 Gene
functional annotation
Function   pectate lyase  
GO BP
GO CC
GO MF
KEGG vvi00040 [list] [network] Pentose and glucuronate interconversions (107 genes)
Protein XP_002270089.1 
BLAST XP_002270089.1 
Orthologous [Ortholog page] LOC542245 (zma)  AT2G02720 (ath)  AT3G01270 (ath)  AT5G15110 (ath)  AT59 (ath)  LOC4328714 (osa)  LOC4340099 (osa)  LOC4340103 (osa)  LOC4340105 (osa)  LOC4341389 (osa)  LOC7457856 (ppo)  LOC7472610 (ppo)  LOC7495953 (ppo)  LOC11406962 (mtr)  LOC11416043 (mtr)  LOC11438708 (mtr)  LOC25495277 (mtr)  LOC25502784 (mtr)  LOC100254377 (vvi)  LOC100257069 (vvi)  LOC100267345 (vvi)  LOC100284055 (zma)  LOC100284356 (zma)  LOC100780236 (gma)  LOC100785801 (gma)  LOC100796307 (gma)  LOC100798579 (gma)  LOC100801864 (gma)  LOC100810615 (gma)  LOC100810857 (gma)  LOC101246909 (sly)  LOC101249735 (sly)  LOC101250914 (sly)  LAT59 (sly)  LOC101260096 (sly)  LOC101264694 (sly)  LOC103827511 (bra)  LOC103836073 (bra)  LOC103839439 (bra)  LOC103842969 (bra)  LOC103846441 (bra)  LOC103850082 (bra)  LOC103850968 (bra)  LOC103853982 (bra)  LOC103856110 (bra)  LOC103858923 (bra)  LOC103872235 (bra)  LOC107275230 (zma) 
Subcellular
localization
wolf
vacu 4,  E.R. 1,  golg 1,  chlo 1,  nucl 1,  cyto 1,  extr 1,  pero 1,  cyto_nucl 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_002270089.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_002270089.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 9
Genes directly connected with LOC100262177 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 LOC100244901 bidirectional sugar transporter SWEET5 [detail] 100244901
6.5 LOC100257069 pectate lyase [detail] 100257069
5.3 LOC100247792 exopolygalacturonase [detail] 100247792
4.3 LOC100246004 GDSL esterase/lipase 7 [detail] 100246004
4.3 LOC100267065 ATPase 8, plasma membrane-type [detail] 100267065
4.3 LOC100852528 putative pectinesterase/pectinesterase inhibitor 28 [detail] 100852528
4.0 LOC100242215 glucan endo-1,3-beta-glucosidase 8 [detail] 100242215
3.1 LOC100250838 calcium-dependent protein kinase 24 [detail] 100250838
3.0 LOC100255508 pollen-specific leucine-rich repeat extensin-like protein 1 [detail] 100255508
Coexpressed
gene list		 [Coexpressed gene list for LOC100262177]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100262177      
Refseq ID (protein) XP_002270089.1 


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