[←][→] osa   Os06g0144200 Gene
functional annotation
Function   pectate lyase  
GO BP
GO CC
GO MF
KEGG osa00040 [list] [network] Pentose and glucuronate interconversions (68 genes)
Protein XP_015642576.1 
BLAST XP_015642576.1 
Orthologous [Ortholog page] LOC542245 (zma)  AT2G02720 (ath)  AT3G01270 (ath)  AT5G15110 (ath)  AT59 (ath)  LOC4328714 (osa)  LOC4340103 (osa)  LOC4340105 (osa)  LOC4341389 (osa)  LOC7457856 (ppo)  LOC7472610 (ppo)  LOC7495953 (ppo)  LOC11406962 (mtr)  LOC11416043 (mtr)  LOC11438708 (mtr)  LOC25495277 (mtr)  LOC25502784 (mtr)  LOC100254377 (vvi)  LOC100257069 (vvi)  LOC100262177 (vvi)  LOC100267345 (vvi)  LOC100284055 (zma)  LOC100284356 (zma)  LOC100780236 (gma)  LOC100785801 (gma)  LOC100796307 (gma)  LOC100798579 (gma)  LOC100801864 (gma)  LOC100810615 (gma)  LOC100810857 (gma)  LOC101246909 (sly)  LOC101249735 (sly)  LOC101250914 (sly)  LAT59 (sly)  LOC101260096 (sly)  LOC101264694 (sly)  LOC103827511 (bra)  LOC103836073 (bra)  LOC103839439 (bra)  LOC103842969 (bra)  LOC103846441 (bra)  LOC103850082 (bra)  LOC103850968 (bra)  LOC103853982 (bra)  LOC103856110 (bra)  LOC103858923 (bra)  LOC103872235 (bra)  LOC107275230 (zma) 
Subcellular
localization
wolf
cyto 3,  chlo 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for XP_015642576.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_015642576.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 5
Genes directly connected with LOC4340099 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.3 LOC4340103 pectate lyase [detail] 4340103
11.8 LOC107281485 uncharacterized LOC107281485 [detail] 107281485
11.5 LOC4341257 berberine bridge enzyme-like 18 [detail] 4341257
9.9 LOC4351129 putative pectinesterase 63 [detail] 4351129
9.8 LOC4329379 uncharacterized LOC4329379 [detail] 4329379
9.3 LOC4350576 uncharacterized LOC4350576 [detail] 4350576
9.2 LOC9268745 proline-rich receptor-like protein kinase PERK4 [detail] 9268745
8.8 LOC4338044 uncharacterized LOC4338044 [detail] 4338044
8.2 LOC4339772 bidirectional sugar transporter SWEET5-like [detail] 4339772
8.0 LOC4336041 pectinesterase [detail] 4336041
7.7 LOC4336801 putative invertase inhibitor [detail] 4336801
7.2 LOC4345903 predicted GPI-anchored protein 33 [detail] 4345903
7.1 LOC107275634 uncharacterized LOC107275634 [detail] 107275634
6.9 LOC4325868 probable serine/threonine-protein kinase PBL23 [detail] 4325868
6.9 LOC4352446 pollen-specific leucine-rich repeat extensin-like protein 3 [detail] 4352446
6.9 LOC4341879 COBRA-like protein 10 [detail] 4341879
6.8 LOC4352536 putative pectinesterase 63 [detail] 4352536
6.8 LOC4339141 L-ascorbate oxidase homolog [detail] 4339141
6.4 LOC4325702 protein SRC2 [detail] 4325702
6.3 LOC4327560 calcium-dependent protein kinase 2-like [detail] 4327560
6.2 LOC4337183 uncharacterized LOC4337183 [detail] 4337183
6.0 LOC107281014 fibroin heavy chain [detail] 107281014
5.8 LOC4335788 uncharacterized LOC4335788 [detail] 4335788
5.5 LOC4338290 receptor-like protein kinase FERONIA [detail] 4338290
5.2 LOC4338597 serrate RNA effector molecule homolog [detail] 4338597
5.0 LOC4329048 BURP domain-containing protein 4-like [detail] 4329048
4.9 LOC4326290 pollen-specific leucine-rich repeat extensin-like protein 4 [detail] 4326290
4.7 LOC4349048 LIM domain-containing protein PLIM2b-like [detail] 4349048
4.5 LOC4344369 pectinesterase [detail] 4344369
4.4 LOC4339811 pathogenesis-related protein 1 [detail] 4339811
4.2 LOC9272438 uncharacterized LOC9272438 [detail] 9272438
4.2 LOC4344643 uncharacterized LOC4344643 [detail] 4344643
4.2 LOC4341158 leaf-specific thionin [detail] 4341158
4.0 LOC4335712 pollen-specific protein C13 [detail] 4335712
3.4 LOC4335062 tyrosine N-monooxygenase [detail] 4335062
3.3 LOC4324197 U-box domain-containing protein 35 [detail] 4324197
3.3 LOC9266639 uncharacterized LOC9266639 [detail] 9266639
3.2 LOC4351651 nifU-like protein 1, chloroplastic [detail] 4351651
Coexpressed
gene list		 [Coexpressed gene list for LOC4340099]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 4340099      
Refseq ID (protein) XP_015642576.1 


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