[←][→] vvi   VIT_00028985001 Gene
functional annotation
Function   pre-mRNA cleavage factor Im 25 kDa subunit 2  
GO BP
GO CC
GO MF
KEGG vvi03015 [list] [network] mRNA surveillance pathway (110 genes)
Protein XP_002267257.1  XP_010662775.1  XP_019081773.1 
BLAST XP_002267257.1  XP_010662775.1  XP_019081773.1 
Orthologous [Ortholog page] AT4G25550 (ath)  LOC4337444 (osa)  LOC25485080 (mtr)  LOC100261950 (vvi)  LOC100273812 (zma)  LOC100282369 (zma)  LOC100306068 (gma)  LOC101249048 (sly)  LOC101268418 (sly)  LOC101268710 (sly)  LOC103834865 (bra)  LOC103861569 (bra)  LOC103863315 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 1,  extr 1,  cyto 1,  mito 1,  vacu 1,  pero 1,  cysk 1,  nucl_plas 1,  cyto_pero 1  (predict for XP_002267257.1)
cyto 6,  cyto_E.R. 4,  cysk 1,  nucl 1,  mito 1,  golg 1,  cysk_plas 1  (predict for XP_010662775.1)
mito 3,  chlo 3,  cyto 2,  mito_plas 2,  nucl 1,  extr 1  (predict for XP_019081773.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002267257.1)
other 5  (predict for XP_010662775.1)
other 7  (predict for XP_019081773.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi00020 Citrate cycle (TCA cycle) 2
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
Genes directly connected with LOC100266110 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.3 LOC100259973 mitochondrial-processing peptidase subunit alpha [detail] 100259973
4.2 LOC100260558 Golgi apparatus membrane protein-like protein ECHIDNA [detail] 100260558
4.2 LOC100250724 cytochrome c1-2, heme protein, mitochondrial [detail] 100250724
Coexpressed
gene list		 [Coexpressed gene list for LOC100266110]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100266110      
Refseq ID (protein) XP_002267257.1 
XP_010662775.1 
XP_019081773.1 


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