[←][→] ath   AT4G25550 Gene
functional annotation
Function   Cleavage/polyadenylation specificity factor, 25kDa subunit  
GO BP
GO:0006378 [list] [network] mRNA polyadenylation  (20 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IBA  
GO CC
GO:0005849 [list] [network] mRNA cleavage factor complex  (14 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_194285.2 
BLAST NP_194285.2 
Orthologous [Ortholog page] LOC4337444 (osa)  LOC25485080 (mtr)  LOC100261950 (vvi)  LOC100266110 (vvi)  LOC100273812 (zma)  LOC100282369 (zma)  LOC100306068 (gma)  LOC101249048 (sly)  LOC101268418 (sly)  LOC101268710 (sly)  LOC103834865 (bra)  LOC103861569 (bra)  LOC103863315 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  extr 1,  pero 1,  cysk 1,  nucl_plas 1  (predict for NP_194285.2)
Subcellular
localization
TargetP
other 7  (predict for NP_194285.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT4G25550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT4G26410 chromosome-associated kinesin [detail] 828747
6.9 PAD2 proteasome alpha subunit D2 [detail] 836746
6.2 PBC2 20S proteasome beta subunit C2 [detail] 844080
Coexpressed
gene list		 [Coexpressed gene list for AT4G25550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245235_at
245235_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245235_at
245235_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245235_at
245235_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828660      
Refseq ID (protein) NP_194285.2 


The preparation time of this page was 0.2 [sec].