[←][→] gma   GLYMA_14G049700 Gene
functional annotation
Function   E3 ubiquitin-protein ligase COP1  
GO BP
GO CC
GO MF
KEGG gmx04120 [list] [network] Ubiquitin mediated proteolysis (219 genes)
gmx04712 [list] [network] Circadian rhythm - plant (104 genes)
Protein XP_003545597.1 
BLAST XP_003545597.1 
Orthologous [Ortholog page] COP1 (sly)  COP1 (ath)  LOC4330868 (osa)  LOC7468530 (ppo)  LOC11420758 (mtr)  LOC100246063 (vvi)  LOC100248310 (vvi)  LOC100279342 (zma)  LOC100286122 (zma)  LOC100813745 (gma)  LOC101249698 (sly)  LOC103867588 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for XP_003545597.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003545597.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 6
gma01200 Carbon metabolism 3
gma04120 Ubiquitin mediated proteolysis 2
gma00620 Pyruvate metabolism 2
gma00710 Carbon fixation in photosynthetic organisms 2
Genes directly connected with LOC100788171 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.4 LOC100813745 E3 ubiquitin-protein ligase COP1 [detail] 100813745
9.3 LCL1 late elongated hypocotyl and circadian clock associated-1-like protein 1 [detail] 100271888
8.8 LOC100779812 uncharacterized LOC100779812 [detail] 100779812
6.7 LOC100775912 uncharacterized LOC100775912 [detail] 100775912
5.8 LOC100818578 DNA repair protein XRCC2 homolog [detail] 100818578
5.8 LOC100800844 NADP-dependent malic enzyme [detail] 100800844
5.6 LOC100778097 uncharacterized LOC100778097 [detail] 100778097
5.4 LOC100815374 uncharacterized LOC100815374 [detail] 100815374
5.1 ALDH11A2 aldehyde dehydrogenase 11A2 [detail] 100789100
Coexpressed
gene list		 [Coexpressed gene list for LOC100788171]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100788171      
Refseq ID (protein) XP_003545597.1 


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