[←][→] gma   GLYMA_17G022300 Gene
functional annotation
Function   chromatin structure-remodeling complex protein SYD  
GO BP
GO CC
GO MF
KEGG
Protein XP_006600334.1  XP_006600335.1  XP_014625014.1  XP_014625015.1 
BLAST XP_006600334.1  XP_006600335.1  XP_014625014.1  XP_014625015.1 
Orthologous [Ortholog page] SYD (ath)  LOC7475387 (ppo)  LOC9267065 (osa)  LOC11418353 (mtr)  LOC100254600 (vvi)  LOC100383943 (zma)  LOC100815262 (gma)  LOC101247785 (sly)  LOC103857840 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for XP_006600334.1)
nucl 10  (predict for XP_006600335.1)
nucl 10  (predict for XP_014625014.1)
nucl 10  (predict for XP_014625015.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006600334.1)
other 8  (predict for XP_006600335.1)
other 8  (predict for XP_014625014.1)
other 8  (predict for XP_014625015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 RNA transport 3
gma03040 Spliceosome 3
Genes directly connected with LOC100790172 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
22.1 LOC100815262 chromatin structure-remodeling complex protein SYD [detail] 100815262
18.0 LOC100818074 uncharacterized LOC100818074 [detail] 100818074
16.5 LOC100817413 THO complex subunit 2 [detail] 100817413
16.0 LOC100808763 serine/threonine-protein kinase SMG1 [detail] 100808763
15.7 LOC100790946 THO complex subunit 2-like [detail] 100790946
15.4 LOC100814320 mucin-17 [detail] 100814320
15.4 LOC100800422 transformation/transcription domain-associated protein [detail] 100800422
14.9 LOC100790179 GRIP and coiled-coil domain-containing protein 2 [detail] 100790179
14.0 LOC100814404 pre-mRNA-processing-splicing factor 8A [detail] 100814404
13.9 LOC100811882 nuclear-pore anchor [detail] 100811882
13.7 LOC100783935 CCR4-NOT transcription complex subunit 1 [detail] 100783935
13.7 LOC100800079 uncharacterized LOC100800079 [detail] 100800079
13.6 LOC100807104 ATP-dependent helicase BRM-like [detail] 100807104
13.4 LOC100808591 transcription elongation factor SPT6 homolog [detail] 100808591
13.2 LOC100810803 mediator of RNA polymerase II transcription subunit 15 [detail] 100810803
13.1 LOC100797445 uncharacterized LOC100797445 [detail] 100797445
12.8 LOC100792961 uncharacterized LOC100792961 [detail] 100792961
12.8 LOC100809207 histone acetyltransferase HAC1 [detail] 100809207
12.6 LOC100809136 transcription elongation factor SPT6 homolog [detail] 100809136
12.6 LOC100806232 uncharacterized LOC100806232 [detail] 100806232
12.4 LOC100779997 chromatin modification-related protein EAF1 B [detail] 100779997
12.4 LOC100788022 nuclear-pore anchor [detail] 100788022
12.2 LOC100783866 transcription initiation factor TFIID subunit 1 [detail] 100783866
12.2 LOC100780184 uncharacterized LOC100780184 [detail] 100780184
12.0 LOC100781696 mediator of RNA polymerase II transcription subunit 12 [detail] 100781696
11.9 LOC100813071 uncharacterized LOC100813071 [detail] 100813071
11.9 LOC100782358 uncharacterized LOC100782358 [detail] 100782358
11.7 LOC100782672 mediator of RNA polymerase II transcription subunit 12 [detail] 100782672
11.6 LOC100779172 uncharacterized LOC100779172 [detail] 100779172
11.6 LOC100806105 uncharacterized LOC100806105 [detail] 100806105
11.5 LOC100810344 chromatin-remodeling ATPase INO80 [detail] 100810344
11.3 LOC100777190 protein MODIFIER OF SNC1 1 [detail] 100777190
11.2 LOC100818992 golgin subfamily A member 4 [detail] 100818992
11.0 LOC100812506 DNA-directed RNA polymerase II subunit 1 [detail] 100812506
10.6 LOC100806985 mediator of RNA polymerase II transcription subunit 12 [detail] 100806985
10.1 LOC100782433 uncharacterized LOC100782433 [detail] 100782433
10.0 LOC100800411 myosin-11 [detail] 100800411
9.8 LOC100800973 DDT domain-containing protein PTM [detail] 100800973
9.8 LOC100780615 chromatin-remodeling ATPase INO80 [detail] 100780615
9.7 LOC100783547 calcineurin-binding protein 1 [detail] 100783547
9.6 LOC100805646 uncharacterized LOC100805646 [detail] 100805646
9.5 LOC100806517 nuclear pore complex protein NUP214 [detail] 100806517
9.2 LOC100805336 mediator of RNA polymerase II transcription subunit 15a [detail] 100805336
9.1 LOC100791832 DDT domain-containing protein PTM [detail] 100791832
9.0 LOC100807457 methyl-CpG-binding domain-containing protein 13 [detail] 100807457
8.8 LOC100791352 dentin sialophosphoprotein [detail] 100791352
8.8 LOC100809750 ISWI chromatin-remodeling complex ATPase CHR11 [detail] 100809750
8.8 LOC100797480 homeobox-DDT domain protein RLT2 [detail] 100797480
8.7 LOC100794911 protein CHROMATIN REMODELING 20-like [detail] 100794911
8.7 LOC100806639 uncharacterized LOC100806639 [detail] 100806639
8.6 LOC100811631 endoribonuclease Dicer homolog 1 [detail] 100811631
8.4 LOC100814240 protein SCAR2 [detail] 100814240
8.4 LOC100785245 FACT complex subunit SPT16 [detail] 100785245
8.3 LOC100797373 uncharacterized LOC100797373 [detail] 100797373
8.3 LOC100788740 phospholipid-transporting ATPase 1 [detail] 100788740
8.3 LOC100784354 bromodomain and WD repeat-containing protein 3 [detail] 100784354
8.0 LOC100795980 tRNA(adenine(34)) deaminase, chloroplastic [detail] 100795980
8.0 LOC100815327 suppressor of RPS4-RLD 1 [detail] 100815327
7.9 LOC100786623 uncharacterized LOC100786623 [detail] 100786623
7.9 LOC100776264 uncharacterized LOC100776264 [detail] 100776264
7.5 LOC100778126 uncharacterized LOC100778126 [detail] 100778126
7.5 LOC100778840 uncharacterized protein DDB_G0284459 [detail] 100778840
7.1 LOC100788560 tRNA(adenine(34)) deaminase, chloroplastic [detail] 100788560
7.0 LOC100783067 transcription initiation factor TFIID subunit 4b [detail] 100783067
6.8 LOC100806495 protein SCAR1-like [detail] 100806495
6.4 LOC547529 probable transcriptional regulator SLK2 [detail] 547529
4.8 LOC100784900 glutamate synthase [NADH], amyloplastic [detail] 100784900
Coexpressed
gene list		 [Coexpressed gene list for LOC100790172]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100790172      
Refseq ID (protein) XP_006600334.1 
XP_006600335.1 
XP_014625014.1 
XP_014625015.1 


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