[←][→] gma   GLYMA_08G172000 Gene
functional annotation
Function   serine/arginine-rich splicing factor SR45  
GO BP
GO CC
GO MF
KEGG gmx03013 [list] [network] RNA transport (283 genes)
gmx03015 [list] [network] mRNA surveillance pathway (224 genes)
Protein XP_003531499.1 
BLAST XP_003531499.1 
Orthologous [Ortholog page] SR45 (ath)  AT1G79100 (ath)  LOC4325394 (osa)  LOC4337561 (osa)  LOC11406805 (mtr)  LOC100267894 (vvi)  LOC100783566 (gma)  LOC101257116 (sly)  LOC103636269 (zma)  LOC103650711 (zma)  LOC103835996 (bra)  LOC103842841 (bra)  LOC103872449 (bra)  LOC113000133 (gma) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  E.R. 1  (predict for XP_003531499.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003531499.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03018 RNA degradation 2
gma03013 RNA transport 2
gma03015 mRNA surveillance pathway 2
Genes directly connected with LOC100804778 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.0 LOC100783566 serine/arginine-rich splicing factor SR45 [detail] 100783566
9.6 LOC100782717 far upstream element-binding protein 1 [detail] 100782717
9.0 LOC100808288 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [detail] 100808288
8.7 LOC100803981 KH and zinc finger (CCCH type) domain-containing protein [detail] 100803981
7.9 LOC100779917 zinc finger CCCH domain-containing protein 40 [detail] 100779917
7.8 LOC100809322 50S ribosomal protein L1 [detail] 100809322
7.6 LOC100802751 exosome complex component RRP45A [detail] 100802751
7.4 LOC100802941 atherin-like [detail] 100802941
7.0 LOC100815466 RNA-binding KH domain-containing protein PEPPER [detail] 100815466
6.3 LOC100780196 exosome complex component RRP45A [detail] 100780196
5.9 LOC100782028 NAC domain containing protein 50 [detail] 100782028
5.9 LOC100793976 zinc finger CCCH domain-containing protein 37 [detail] 100793976
4.7 LOC100808887 poly(rC)-binding protein 4 [detail] 100808887
Coexpressed
gene list		 [Coexpressed gene list for LOC100804778]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100804778      
Refseq ID (protein) XP_003531499.1 


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