[←][→] sly   101250296 Gene
functional annotation
Function   pre-mRNA-processing protein 40C  
GO BP
GO CC
GO MF
KEGG sly03040 [list] [network] Spliceosome (188 genes)
Protein XP_004236882.1  XP_010319354.1  XP_010319355.1  XP_025886357.1 
BLAST XP_004236882.1  XP_010319354.1  XP_010319355.1  XP_025886357.1 
Orthologous [Ortholog page] PRP40C (ath)  LOC4348939 (osa)  LOC7498165 (ppo)  LOC11443624 (mtr)  LOC100254722 (vvi)  LOC100304231 (zma)  LOC100806139 (gma)  LOC100815386 (gma)  LOC100816454 (gma)  LOC103869415 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for XP_004236882.1)
nucl 10  (predict for XP_010319354.1)
nucl 10  (predict for XP_010319355.1)
nucl 6,  chlo 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_025886357.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_004236882.1)
chlo 8,  other 3  (predict for XP_010319354.1)
chlo 8,  other 3  (predict for XP_010319355.1)
mito 6  (predict for XP_025886357.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 RNA transport 2
sly03015 mRNA surveillance pathway 2
Genes directly connected with LOC101250296 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 LOC101263053 serine/arginine repetitive matrix protein 1 [detail] 101263053
5.9 LOC101266504 spliceosome-associated protein 130 A [detail] 101266504
5.8 SGS3 SGS3-like protein [detail] 100134882
4.4 LOC101246414 FRIGIDA-like protein 3 [detail] 101246414
Coexpressed
gene list		 [Coexpressed gene list for LOC101250296]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 101250296      
Refseq ID (protein) XP_004236882.1 
XP_010319354.1 
XP_010319355.1 
XP_025886357.1 


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