[←][→] osa   Os10g0485000 Gene
functional annotation
Function   pre-mRNA-processing protein 40C  
GO BP
GO CC
GO MF
KEGG osa03040 [list] [network] Spliceosome (195 genes)
Protein XP_015614639.1  XP_015614640.1  XP_015614641.1 
BLAST XP_015614639.1  XP_015614640.1  XP_015614641.1 
Orthologous [Ortholog page] PRP40C (ath)  LOC7498165 (ppo)  LOC11443624 (mtr)  LOC100254722 (vvi)  LOC100304231 (zma)  LOC100806139 (gma)  LOC100815386 (gma)  LOC100816454 (gma)  LOC101250296 (sly)  LOC103869415 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for XP_015614639.1)
nucl 9  (predict for XP_015614640.1)
chlo 6,  nucl 4  (predict for XP_015614641.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015614639.1)
other 8  (predict for XP_015614640.1)
mito 3  (predict for XP_015614641.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03013 RNA transport 2
Genes directly connected with LOC4348939 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 LOC4352932 structural maintenance of chromosomes protein 1 [detail] 4352932
9.4 LOC4324336 THO complex subunit 2 [detail] 4324336
9.0 LOC4329455 SART-1 family protein DOT2 [detail] 4329455
7.9 LOC4325002 ubinuclein-1 [detail] 4325002
7.9 LOC4325055 transcription initiation factor TFIID subunit 12 [detail] 4325055
7.8 LOC4352386 uncharacterized LOC4352386 [detail] 4352386
7.3 LOC4337211 BRCA1-associated protein [detail] 4337211
7.3 LOC4340752 kanadaptin [detail] 4340752
7.2 LOC9267538 uncharacterized LOC9267538 [detail] 9267538
6.6 LOC4329919 putative RNA-binding protein Luc7-like 2 [detail] 4329919
6.5 LOC4329863 protein GLE1 [detail] 4329863
6.5 LOC4331353 THO complex subunit 1 [detail] 4331353
5.3 LOC4332713 U11/U12 small nuclear ribonucleoprotein 65 kDa protein [detail] 4332713
4.2 LOC9271781 uncharacterized LOC9271781 [detail] 9271781
Coexpressed
gene list		 [Coexpressed gene list for LOC4348939]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 4348939      
Refseq ID (protein) XP_015614639.1 
XP_015614640.1 
XP_015614641.1 


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