ATTED-II : GeneID search result

[←][→] mtr MTR_5g030950 Gene

functional annotation

Function

serine hydroxymethyltransferase, mitochondrial

GO BP

GO CC

GO MF

KEGG

mtr00260 [list] [network] Glycine, serine and threonine metabolism (68 genes)

mtr00460 [list] [network] Cyanoamino acid metabolism (60 genes)

mtr00630 [list] [network] Glyoxylate and dicarboxylate metabolism (61 genes)

mtr00670 [list] [network] One carbon pool by folate (22 genes)

mtr01200 [list] [network] Carbon metabolism (244 genes)

mtr01230 [list] [network] Biosynthesis of amino acids (223 genes)

Protein

XP_003612954.1

BLAST

XP_003612954.1

Orthologous

[Ortholog page] SHM1 (ath) SHM2 (ath) LOC4334048 (osa) LOC7461838 (ppo) LOC7497767 (ppo) LOC11429401 (mtr) LOC100243424 (vvi) LOC100245411 (vvi) LOC100261289 (vvi) LOC100499634 (gma) LOC100499635 (gma) LOC100812952 (gma) LOC100816213 (gma) LOC101254439 (sly) LOC101264818 (sly) LOC103830855 (bra) LOC103831657 (bra) LOC103835059 (bra) LOC103856643 (bra) LOC113664104 (zma)

Subcellular
localization
wolf

mito 6, chlo_mito 5, chlo 2

(predict for XP_003612954.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_003612954.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr01200	Carbon metabolism	4
mtr01230	Biosynthesis of amino acids	3
mtr00710	Carbon fixation in photosynthetic organisms	2
mtr00260	Glycine, serine and threonine metabolism	2

Genes directly connected with LOC11405458 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.6	LOC11441719	peroxiredoxin Q, chloroplastic	[detail]	11441719
5.5	LOC25493131	30S ribosomal protein S5, chloroplastic	[detail]	25493131
5.4	LOC11421966	phosphoglycerate kinase 3, cytosolic	[detail]	11421966

Coexpressed
gene list

Gene expression

All samples

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