ATTED-II : GeneID search result

[←][→] ath AT4G17100 Gene

functional annotation

Function

poly(U)-specific endoribonuclease-B protein

GO BP

GO CC

GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001319974.1 NP_193443.4

BLAST

NP_001319974.1 NP_193443.4

Orthologous

[Ortholog page] FH3 (ath) NRPD4 (ath) AT4G16150 (ath) AT4G35335 (ath) LOS1 (ath) AT3G12915 (ath) LOC4324669 (osa) LOC4326544 (osa) LOC4329493 (osa) LOC4334959 (osa) LOC7483076 (ppo) LOC7492112 (ppo) LOC11406801 (mtr) LOC11408360 (mtr) LOC11415386 (mtr) LOC25483153 (mtr) LOC100261253 (vvi) LOC100272648 (zma) LOC100285098 (zma) LOC100788357 (gma) LOC100804251 (gma) LOC101254320 (sly) LOC103644298 (zma) LOC103644301 (zma) LOC103835224 (bra) LOC103854706 (bra) LOC103865495 (bra)

Subcellular
localization
wolf

nucl 9	(predict for NP_001319974.1)
cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3	(predict for NP_193443.4)

Subcellular
localization
TargetP

other 7	(predict for NP_001319974.1)
other 7, scret 4	(predict for NP_193443.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G17100 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.4	ATMPK8	Protein kinase superfamily protein	[detail]	838394
5.4	AT2G46170	Reticulon family protein	[detail]	819224
5.1	AT4G30650	Low temperature and salt responsive protein family	[detail]	829188

Coexpressed
gene list

[Coexpressed gene list for AT4G17100]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245432_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245432_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245432_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	3770328
Refseq ID (protein)	NP_001319974.1
Refseq ID (protein)	NP_193443.4

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