[←][→] ath   AT4G15950 Gene
functional annotation
Function   RNA polymerase II, Rpb4, core protein  
GO BP
GO:0010426 [list] [network] DNA methylation on cytosine within a CHH sequence  (2 genes)  IMP  
GO:0030422 [list] [network] production of siRNA involved in RNA interference  (34 genes)  IGI  
GO:0016246 [list] [network] RNA interference  (41 genes)  IMP  
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (15 genes)  IDA IPI  
GO:0000419 [list] [network] RNA polymerase V complex  (21 genes)  IDA IPI  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA  
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_193330.3 
BLAST NP_193330.3 
Orthologous [Ortholog page] FH3 (ath)  AT4G16150 (ath)  AT4G35335 (ath)  LOS1 (ath)  AT3G12915 (ath)  AT4G17100 (ath)  LOC4324669 (osa)  LOC4326544 (osa)  LOC4329493 (osa)  LOC4334959 (osa)  LOC7483076 (ppo)  LOC7492112 (ppo)  LOC11406801 (mtr)  LOC11408360 (mtr)  LOC11415386 (mtr)  LOC25483153 (mtr)  LOC100261253 (vvi)  LOC100272648 (zma)  LOC100285098 (zma)  LOC100788357 (gma)  LOC100804251 (gma)  LOC101254320 (sly)  LOC103644298 (zma)  LOC103644301 (zma)  LOC103835224 (bra)  LOC103854706 (bra)  LOC103865495 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_193330.3)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for NP_193330.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with NRPD4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AT1G05970 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 837107
5.4 DWA1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 [detail] 816462
5.2 AT3G07200 RING/U-box superfamily protein [detail] 819908
4.5 MBD5 methyl-CPG-binding domain protein 5 [detail] 823811
4.4 AT4G10420 FBD / Leucine Rich Repeat domains containing protein [detail] 826634
Coexpressed
gene list		 [Coexpressed gene list for NRPD4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245526_at
245526_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245526_at
245526_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245526_at
245526_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827277      
Refseq ID (protein) NP_193330.3 


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