[←][→] gma   GLYMA_12G038200 Gene
functional annotation
Function   squalene synthase  
GO BP
GO CC
GO MF
KEGG gmx00100 [list] [network] Steroid biosynthesis (58 genes)
gmx00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (27 genes)
Protein NP_001236365.2  NP_001338965.1 
BLAST NP_001236365.2  NP_001338965.1 
Orthologous [Ortholog page] LOC541614 (zma)  SQS1 (ath)  SQS2 (ath)  LOC4334492 (osa)  LOC4342663 (osa)  LOC7461247 (ppo)  LOC7494303 (ppo)  LOC11441556 (mtr)  LOC100191601 (zma)  LOC100265798 (vvi)  SQS1 (sly)  LOC100775983 (gma)  SQS2 (sly)  LOC103834400 (bra)  LOC103836007 (bra)  LOC103836099 (bra)  LOC103862364 (bra) 
Subcellular
localization
wolf
cyto 5,  cysk 3,  cyto_E.R. 3  (predict for NP_001236365.2)
cyto 5,  cysk 3,  cyto_E.R. 3  (predict for NP_001338965.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001236365.2)
other 7  (predict for NP_001338965.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
gma00190 Oxidative phosphorylation 2
Genes directly connected with LOC547940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 LOC100782459 ATPase 11, plasma membrane-type [detail] 100782459
6.7 LOC100775983 squalene synthase [detail] 100775983
6.4 LOC100807707 protein STRUBBELIG-RECEPTOR FAMILY 6 [detail] 100807707
5.9 CHR2 chalcone reductase CHR2 [detail] 100786750
4.3 LOC100790769 tobamovirus multiplication protein 1 [detail] 100790769
Coexpressed
gene list		 [Coexpressed gene list for LOC547940]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 547940      
Refseq ID (protein) NP_001236365.2 
NP_001338965.1 


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