[←][→] ppo   POPTR_007G070700v3 Gene
functional annotation
Function   probable splicing factor 3A subunit 1  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_024460900.1  XP_024460901.1  XP_024460902.1  XP_024460903.1  XP_024460904.1 
BLAST XP_024460900.1  XP_024460901.1  XP_024460902.1  XP_024460903.1  XP_024460904.1 
Orthologous [Ortholog page] AT3G49130 (ath)  AT4G16200 (ath)  AT5G06520 (ath)  AT1G14640 (ath)  AT1G14650 (ath)  LOC4328860 (osa)  LOC11411169 (mtr)  LOC100242352 (vvi)  LOC100242416 (vvi)  LOC100383468 (zma)  LOC100786120 (gma)  LOC100790309 (gma)  LOC100794736 (gma)  LOC100797261 (gma)  LOC101246043 (sly)  LOC101250651 (sly)  LOC102666446 (gma)  LOC103634672 (zma)  LOC103836060 (bra)  LOC103842679 (bra)  LOC103864623 (bra)  LOC103872261 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_024460900.1)
cyto 6,  nucl 4  (predict for XP_024460901.1)
cyto 6,  nucl 4  (predict for XP_024460902.1)
cyto 6,  nucl 4  (predict for XP_024460903.1)
cyto 6,  nucl 4  (predict for XP_024460904.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_024460900.1)
chlo 8,  other 4  (predict for XP_024460901.1)
chlo 8,  other 4  (predict for XP_024460902.1)
chlo 8,  other 4  (predict for XP_024460903.1)
chlo 8,  other 4  (predict for XP_024460904.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 RNA transport 2
ppo03015 mRNA surveillance pathway 2
Genes directly connected with LOC7462542 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 LOC7469047 biorientation of chromosomes in cell division protein 1-like 1 [detail] 7469047
8.8 LOC7490860 U1 small nuclear ribonucleoprotein A [detail] 7490860
8.5 LOC7459056 RNA-binding protein 25 [detail] 7459056
8.2 LOC7479200 luc7-like protein 3 [detail] 7479200
7.9 LOC7470527 pinin [detail] 7470527
7.6 LOC7461490 pre-mRNA-processing factor 39 [detail] 7461490
7.3 LOC7477106 apoptotic chromatin condensation inducer in the nucleus [detail] 7477106
7.1 LOC7471740 DEAD-box ATP-dependent RNA helicase 42 [detail] 7471740
7.0 LOC7460927 uncharacterized LOC7460927 [detail] 7460927
6.8 LOC7490968 DUF724 domain-containing protein 1 [detail] 7490968
6.7 LOC7476292 uncharacterized LOC7476292 [detail] 7476292
6.3 LOC7487563 uncharacterized LOC7487563 [detail] 7487563
6.0 LOC7465611 general transcription factor 3C polypeptide 5 [detail] 7465611
5.9 LOC7486041 traB domain-containing protein [detail] 7486041
5.6 LOC7473016 glycine-rich RNA-binding protein RZ1A [detail] 7473016
5.6 LOC7477418 mediator of RNA polymerase II transcription subunit 16 [detail] 7477418
5.5 LOC7480355 uncharacterized LOC7480355 [detail] 7480355
5.5 LOC7479306 mitogen-activated protein kinase kinase kinase YODA [detail] 7479306
5.0 LOC7497249 UDP-N-acetylglucosamine transferase subunit ALG14 homolog [detail] 7497249
4.8 LOC7469228 protein SET DOMAIN GROUP 41 [detail] 7469228
4.7 LOC7465484 uncharacterized LOC7465484 [detail] 7465484
4.7 LOC7473433 uncharacterized LOC7473433 [detail] 7473433
4.5 LOC7456069 protein SUPPRESSOR OF FRI 4 [detail] 7456069
4.2 LOC7491640 methyltransferase-like protein 13 [detail] 7491640
Coexpressed
gene list		 [Coexpressed gene list for LOC7462542]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7462542      
Refseq ID (protein) XP_024460900.1 
XP_024460901.1 
XP_024460902.1 
XP_024460903.1 
XP_024460904.1 


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