[←][→] ath   AT5G06520 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein  
GO BP
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0005686 [list] [network] U2 snRNP  (32 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_196270.1 
BLAST NP_196270.1 
Orthologous [Ortholog page] AT3G49130 (ath)  AT4G16200 (ath)  AT1G14640 (ath)  AT1G14650 (ath)  LOC4328860 (osa)  LOC7462542 (ppo)  LOC11411169 (mtr)  LOC100242352 (vvi)  LOC100242416 (vvi)  LOC100383468 (zma)  LOC100786120 (gma)  LOC100790309 (gma)  LOC100794736 (gma)  LOC100797261 (gma)  LOC101246043 (sly)  LOC101250651 (sly)  LOC102666446 (gma)  LOC103634672 (zma)  LOC103836060 (bra)  LOC103842679 (bra)  LOC103864623 (bra)  LOC103872261 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1,  cyto_plas 1  (predict for NP_196270.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for NP_196270.1)
Gene coexpression
Network*for
coexpressed
genes
Coexpressed
gene list		 [Coexpressed gene list for AT5G06520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250677_at
250677_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250677_at
250677_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250677_at
250677_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830540      
Refseq ID (protein) NP_196270.1 


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