[←][→] ppo   POPTR_006G265700v3 Gene
functional annotation
Function   protein RRC1  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_024459609.1  XP_024459610.1 
BLAST XP_024459609.1  XP_024459610.1 
Orthologous [Ortholog page] AT5G10800 (ath)  RRC1 (ath)  LOC4328504 (osa)  LOC11440509 (mtr)  LOC100262865 (vvi)  LOC100304259 (zma)  LOC100775729 (gma)  LOC100776093 (gma)  LOC101261199 (sly)  LOC103626713 (zma)  LOC103837075 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 3,  cyto_nucl 3  (predict for XP_024459609.1)
nucl 9  (predict for XP_024459610.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024459609.1)
other 8,  chlo 3  (predict for XP_024459610.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 RNA transport 3
Genes directly connected with LOC7489161 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 LOC7460377 pre-mRNA-splicing factor CWC22 homolog [detail] 7460377
7.3 LOC7458633 regulator of nonsense transcripts UPF2 [detail] 7458633
6.7 LOC7470720 serine/arginine repetitive matrix protein 2 [detail] 7470720
6.6 LOC7494297 putative transcription elongation factor SPT5 homolog 1 [detail] 7494297
6.5 LOC7480195 protein spt2 [detail] 7480195
6.3 LOC7460223 intron-binding protein aquarius [detail] 7460223
5.7 LOC7481594 transcription initiation factor TFIID subunit 15 [detail] 7481594
5.5 LOC7462096 DEAD-box ATP-dependent RNA helicase 18 [detail] 7462096
5.5 LOC7492108 peptidyl-prolyl cis-trans isomerase CYP59 [detail] 7492108
5.4 LOC7480693 NF-kappa-B-activating protein [detail] 7480693
5.0 LOC7462781 trihelix transcription factor ASIL2 [detail] 7462781
Coexpressed
gene list		 [Coexpressed gene list for LOC7489161]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7489161      
Refseq ID (protein) XP_024459609.1 
XP_024459610.1 


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