[←][→] ath   AT5G25060 Gene
functional annotation
Function   RNA recognition motif (RRM)-containing protein  
GO BP
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_568464.1 
BLAST NP_568464.1 
Orthologous [Ortholog page] AT5G10800 (ath)  LOC4328504 (osa)  LOC7489161 (ppo)  LOC11440509 (mtr)  LOC100262865 (vvi)  LOC100304259 (zma)  LOC100775729 (gma)  LOC100776093 (gma)  LOC101261199 (sly)  LOC103626713 (zma)  LOC103837075 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1  (predict for NP_568464.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_568464.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
Genes directly connected with RRC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 DOT2 SART-1 family [detail] 831541
10.6 TAF4 TBP-associated factor 4 [detail] 834330
10.1 AT4G21660 proline-rich spliceosome-associated (PSP) family protein [detail] 828253
8.9 AT5G45190 Cyclin family protein [detail] 834555
7.9 HUB2 histone mono-ubiquitination 2 [detail] 841968
7.8 AT1G28060 Pre-mRNA-splicing factor 3 [detail] 839699
7.6 AT2G35330 RING/U-box superfamily protein [detail] 818100
7.4 AT1G01930 zinc finger protein-like protein [detail] 839310
7.1 FHY3 far-red elongated hypocotyls 3 [detail] 821781
6.6 AT5G23890 GPI-anchored adhesin-like protein [detail] 832454
Coexpressed
gene list		 [Coexpressed gene list for RRC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246924_at
246924_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246924_at
246924_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246924_at
246924_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832577      
Refseq ID (protein) NP_568464.1 


The preparation time of this page was 0.2 [sec].