[←][→] sly   778316 Gene
functional annotation
Function   U1 small nuclear ribonucleoprotein C-like  
GO BP
GO CC
GO MF
KEGG sly03040 [list] [network] Spliceosome (188 genes)
Protein NP_001234106.1  XP_010321699.1  XP_025887102.1 
BLAST NP_001234106.1  XP_010321699.1  XP_025887102.1 
Orthologous [Ortholog page] AT4G03120 (ath)  LOC4328958 (osa)  LOC7475730 (ppo)  LOC25484788 (mtr)  LOC25499578 (mtr)  LOC100192596 (zma)  LOC100263028 (vvi)  LOC100790892 (gma)  LOC100795821 (gma)  LOC101263748 (sly)  LOC103846873 (bra)  LOC103858717 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001234106.1)
nucl 7,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_010321699.1)
nucl 7,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_025887102.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001234106.1)
other 8  (predict for XP_010321699.1)
other 8  (predict for XP_025887102.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
Genes directly connected with LOC778316 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 LOC101257116 serine/arginine-rich splicing factor SR45 [detail] 101257116
5.7 LOC101265441 probable gamma-secretase subunit PEN-2 [detail] 101265441
5.6 LOC101251543 polyadenylate-binding protein RBP47B' [detail] 101251543
4.6 LOC101267868 uncharacterized protein At4g29660 [detail] 101267868
4.1 LOC101252475 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [detail] 101252475
Coexpressed
gene list		 [Coexpressed gene list for LOC778316]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 778316      
Refseq ID (protein) NP_001234106.1 
XP_010321699.1 
XP_025887102.1 


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