[←][→] ath   AT4G03120 Gene
functional annotation
Function   C2H2 and C2HC zinc fingers superfamily protein  
GO BP
GO:0000395 [list] [network] mRNA 5'-splice site recognition  (2 genes)  IBA  
GO CC
GO:0005685 [list] [network] U1 snRNP  (17 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030627 [list] [network] pre-mRNA 5'-splice site binding  (2 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_567250.1 
BLAST NP_567250.1 
Orthologous [Ortholog page] LOC778316 (sly)  LOC4328958 (osa)  LOC7475730 (ppo)  LOC25484788 (mtr)  LOC25499578 (mtr)  LOC100192596 (zma)  LOC100263028 (vvi)  LOC100790892 (gma)  LOC100795821 (gma)  LOC101263748 (sly)  LOC103846873 (bra)  LOC103858717 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_567250.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_567250.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT4G03120 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT4G28990 RNA-binding protein-like protein [detail] 829020
6.9 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [detail] 829247
6.7 SR45 arginine/serine-rich 45 [detail] 838230
6.4 NRPB8A RNA polymerase Rpb8 [detail] 841866
5.5 AT5G14140 nucleic acid binding / zinc ion binding protein [detail] 831264
4.9 AT5G44500 Small nuclear ribonucleoprotein family protein [detail] 834477
Coexpressed
gene list		 [Coexpressed gene list for AT4G03120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255431_at
255431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255431_at
255431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255431_at
255431_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828071      
Refseq ID (protein) NP_567250.1 


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