[][] ath   AT2G25930 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein
GO BP
GO:0010031 [list] [network] circumnutation  (7 genes)  IMP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IEA  
GO:0048573 [list] [network] photoperiodism, flowering  (67 genes)  IMP  
GO:0010119 [list] [network] regulation of stomatal movement  (88 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008022 [list] [network] protein C-terminus binding  (6 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_180164.1 
BLAST NP_180164.1 
Orthologous [Ortholog page] LOC4327931 (osa)LOC4340087 (osa)LOC7470724 (ppo)LOC11431402 (mtr)LOC25482012 (mtr)LOC25500383 (mtr)LOC100255961 (vvi)LOC100256592 (vvi)LOC100383534 (zma)LOC100788038 (gma)ELF3A (gma)ELF3B (gma)LOC100820110 (gma)LOC101245619 (sly)LOC101265040 (sly)LOC101267430 (sly)LOC101268174 (sly)LOC102663657 (gma)LOC103249168 (bra)LOC103630791 (zma)LOC103864705 (bra)
Subcellular
localization
wolf
nucl 10  (predict for NP_180164.1)
Subcellular
localization
TargetP
other 8  (predict for NP_180164.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with ELF3 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
10.1 TOC1 CCT motif -containing response regulator protein [detail] 836259
8.3 AT2G25730 zinc finger FYVE domain protein [detail] 817114
7.9 COL9 CONSTANS-like 9 [detail] 819956
5.7 AT3G14172 GPI-anchored adhesin-like protein [detail] 5007999
5.3 AT1G32090 early-responsive to dehydration stress protein (ERD4) [detail] 840101
Coexpressed
gene list
[Coexpressed gene list for ELF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266839_at
266839_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266839_at
266839_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
266839_at
266839_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 817134    
Refseq ID (protein) NP_180164.1 


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