[←][→] ath   AT2G45140 Gene
functional annotation
Function   plant VAP homolog 12  
GO BP
GO:0061817 [list] [network] endoplasmic reticulum-plasma membrane tethering  (9 genes)  IBA  
GO:0090158 [list] [network] endoplasmic reticulum membrane organization  (9 genes)  IBA  
GO:0006605 [list] [network] protein targeting  (212 genes)  IDA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001324913.1  NP_182039.1 
BLAST NP_001324913.1  NP_182039.1 
Orthologous [Ortholog page] VAP27-1 (ath)  AT4G00170 (ath)  LOC4336509 (osa)  LOC4344689 (osa)  LOC4344695 (osa)  LOC7453956 (ppo)  LOC7471620 (ppo)  LOC11412003 (mtr)  LOC11424030 (mtr)  LOC11426935 (mtr)  LOC100191705 (zma)  LOC100253897 (vvi)  LOC100253999 (vvi)  LOC100257387 (vvi)  LOC100280363 (zma)  LOC100286234 (zma)  LOC100305725 (gma)  LOC100779655 (gma)  LOC100791280 (gma)  LOC100798247 (gma)  LOC100805159 (gma)  LOC101244532 (sly)  LOC101245885 (sly)  LOC101254623 (sly)  LOC101264447 (sly)  LOC103830133 (bra)  LOC103830268 (bra)  LOC103841907 (bra)  LOC103858157 (bra)  LOC103858877 (bra)  LOC103862872 (bra)  LOC103866194 (bra) 
Subcellular
localization
wolf
golg 4,  cyto 2,  nucl 1,  E.R._plas 1,  plas 1,  E.R. 1,  cyto_pero 1  (predict for NP_001324913.1)
golg 4,  nucl 2,  cyto 1,  E.R._plas 1,  plas 1,  E.R. 1,  cysk_nucl 1  (predict for NP_182039.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001324913.1)
other 8  (predict for NP_182039.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
Genes directly connected with PVA12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 VAP27-1 vesicle associated protein [detail] 825231
6.0 ATS9 non-ATPase subunit 9 [detail] 839789
6.0 YKT61 SNARE-like superfamily protein [detail] 835918
5.4 AT5G19050 alpha/beta-Hydrolases superfamily protein [detail] 832024
5.3 ATHM3 Thioredoxin superfamily protein [detail] 816050
Coexpressed
gene list		 [Coexpressed gene list for PVA12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266103_at
266103_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266103_at
266103_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266103_at
266103_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819122      
Refseq ID (protein) NP_001324913.1 
NP_182039.1 


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