[←][→] ath   AT4G00170 Gene
functional annotation
Function   Plant VAMP (vesicle-associated membrane protein) family protein  
GO BP
GO:0061817 [list] [network] endoplasmic reticulum-plasma membrane tethering  (9 genes)  IBA  
GO:0090158 [list] [network] endoplasmic reticulum membrane organization  (9 genes)  IBA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001329892.1  NP_567153.1 
BLAST NP_001329892.1  NP_567153.1 
Orthologous [Ortholog page] PVA12 (ath)  VAP27-1 (ath)  LOC4336509 (osa)  LOC4344689 (osa)  LOC4344695 (osa)  LOC7453956 (ppo)  LOC7471620 (ppo)  LOC11412003 (mtr)  LOC11424030 (mtr)  LOC11426935 (mtr)  LOC100191705 (zma)  LOC100253897 (vvi)  LOC100253999 (vvi)  LOC100257387 (vvi)  LOC100280363 (zma)  LOC100286234 (zma)  LOC100305725 (gma)  LOC100779655 (gma)  LOC100791280 (gma)  LOC100798247 (gma)  LOC100805159 (gma)  LOC101244532 (sly)  LOC101245885 (sly)  LOC101254623 (sly)  LOC101264447 (sly)  LOC103830133 (bra)  LOC103830268 (bra)  LOC103841907 (bra)  LOC103858157 (bra)  LOC103858877 (bra)  LOC103862872 (bra)  LOC103866194 (bra) 
Subcellular
localization
wolf
chlo 4,  golg 2,  chlo_mito 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001329892.1)
golg 3,  pero 2,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_567153.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001329892.1)
other 7,  chlo 3  (predict for NP_567153.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath03010 Ribosome 2
Genes directly connected with AT4G00170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819606
5.5 COP8 Proteasome component (PCI) domain protein [detail] 834312
5.5 AT3G25545 trigger factor [detail] 822141
5.3 AT2G33845 Nucleic acid-binding, OB-fold-like protein [detail] 817953
Coexpressed
gene list		 [Coexpressed gene list for AT4G00170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255704_at
255704_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255704_at
255704_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255704_at
255704_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828017      
Refseq ID (protein) NP_001329892.1 
NP_567153.1 


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