[←][→] ath   AT2G47300 Gene
functional annotation
Function   ribonuclease Ps  
GO BP
GO:0008033 [list] [network] tRNA processing  (94 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001078072.1  NP_001078073.1  NP_001324565.1 
BLAST NP_001078072.1  NP_001078073.1  NP_001324565.1 
Orthologous [Ortholog page] LOC4351115 (osa)  LOC25491287 (mtr)  LOC100249005 (vvi)  LOC100263441 (vvi)  LOC100787335 (gma)  LOC100788705 (gma)  LOC100798058 (gma)  LOC100854265 (vvi)  LOC101252549 (sly)  LOC103633590 (zma)  LOC103863563 (bra)  LOC104877333 (vvi)  LOC109123153 (vvi) 
Subcellular
localization
wolf
nucl 6,  cysk 2,  chlo 1  (predict for NP_001078072.1)
nucl 4,  chlo 2,  nucl_plas 2,  cyto 1,  mito 1  (predict for NP_001078073.1)
nucl 5,  chlo 2,  cyto 1,  cysk 1  (predict for NP_001324565.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001078072.1)
mito 7  (predict for NP_001078073.1)
chlo 7  (predict for NP_001324565.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with POP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824504
8.2 AT3G13880 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820601
7.8 AT5G49110 fanconi anemia group I-like protein [detail] 834970
7.1 LOI1 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827142
6.4 AT5G61950 Ubiquitin carboxyl-terminal hydrolase-related protein [detail] 836316
Coexpressed
gene list		 [Coexpressed gene list for POP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260575_at
260575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260575_at
260575_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260575_at
260575_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819343      
Refseq ID (protein) NP_001078072.1 
NP_001078073.1 
NP_001324565.1 


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