[←][→] ath   AT3G05070 Gene
functional annotation
Function   Cwf18 pre-mRNA splicing factor  
GO BP
GO CC
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IBA  
GO:0005684 [list] [network] U2-type spliceosomal complex  (44 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_566245.1 
BLAST NP_566245.1 
Orthologous [Ortholog page] LOC4342149 (osa)  LOC7494376 (ppo)  LOC25484545 (mtr)  LOC100244142 (vvi)  LOC100273359 (zma)  LOC100306131 (gma)  LOC100527227 (gma)  LOC101249091 (sly)  LOC103859076 (bra)  LOC103870859 (bra) 
Subcellular
localization
wolf
nucl 5,  mito 4  (predict for NP_566245.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566245.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
Genes directly connected with AT3G05070 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 SCI1 splicing regulatory glutamine/lysine-rich-like protein [detail] 844261
7.2 AT2G45520 coiled-coil protein [detail] 819160
6.9 NRPB6A RNA polymerase Rpb6 [detail] 835269
6.5 ATE1 ATPase E1 [detail] 837930
5.8 AT5G10350 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 830899
5.3 AT2G34450 HMG-box (high mobility group) DNA-binding family protein [detail] 818008
4.6 AT5G55640 Na-translocating NADH-quinone reductase subunit A [detail] 835658
Coexpressed
gene list		 [Coexpressed gene list for AT3G05070]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259305_at
259305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259305_at
259305_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259305_at
259305_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819669      
Refseq ID (protein) NP_566245.1 


The preparation time of this page was 0.1 [sec].