[←][→] ath   AT3G05060 Gene
functional annotation
Function   NOP56-like pre RNA processing ribonucleoprotein  
GO BP
GO:0042254 [list] [network] ribosome biogenesis  (378 genes)  IEA  
GO CC
GO:0031428 [list] [network] box C/D snoRNP complex  (16 genes)  IBA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030515 [list] [network] snoRNA binding  (19 genes)  IBA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_187157.1 
BLAST NP_187157.1 
Orthologous [Ortholog page] AT5G27120 (ath)  LOC4332840 (osa)  LOC4332841 (osa)  LOC7473909 (ppo)  LOC11436777 (mtr)  LOC11437645 (mtr)  LOC100248675 (vvi)  LOC100384739 (zma)  LOC100775301 (gma)  LOC100784721 (gma)  LOC101255995 (sly)  LOC101263757 (sly)  LOC103631271 (zma)  LOC103639139 (zma)  LOC103649398 (zma)  LOC103837322 (bra)  LOC103874558 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_187157.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for NP_187157.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
Genes directly connected with AT3G05060 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
21.2 NOP56 NOP56-like pre RNA processing ribonucleoprotein [detail] 842063
19.4 NAP57 homologue of NAP57 [detail] 824882
16.2 AT5G27120 NOP56-like pre RNA processing ribonucleoprotein [detail] 832770
13.4 NSN1 GTP-binding family protein [detail] 819890
13.0 AT3G18600 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 821391
12.7 ATG2 metallopeptidase M24 family protein [detail] 824343
12.3 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein [detail] 820468
11.4 HD2B histone deacetylase 2B [detail] 832328
10.3 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family protein [detail] 818377
10.1 La1 La protein 1 [detail] 829408
9.6 AT3G57000 nucleolar essential protein-like protein [detail] 824867
9.5 STRS1 DEA(D/H)-box RNA helicase family protein [detail] 840087
Coexpressed
gene list		 [Coexpressed gene list for AT3G05060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259311_at
259311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259311_at
259311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259311_at
259311_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819668      
Refseq ID (protein) NP_187157.1 


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