[←][→] ath   AT3G07880 Gene
functional annotation
Function   Immunoglobulin E-set superfamily protein  
GO BP
GO:0007266 [list] [network] Rho protein signal transduction  (17 genes)  IBA  
GO:0010053 [list] [network] root epidermal cell differentiation  (127 genes)  IMP  
GO:0009932 [list] [network] cell tip growth  (155 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0016020 [list] [network] membrane  (7839 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005094 [list] [network] Rho GDP-dissociation inhibitor activity  (3 genes)  IBA  
GO:0048365 [list] [network] Rac GTPase binding  (4 genes)  IBA  
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_187445.1 
BLAST NP_187445.1 
Orthologous [Ortholog page] AT1G12070 (ath)  AT1G62450 (ath)  LOC4324324 (osa)  LOC4340881 (osa)  LOC7455832 (ppo)  LOC7455982 (ppo)  LOC7458267 (ppo)  LOC7488584 (ppo)  LOC11411050 (mtr)  LOC11432726 (mtr)  LOC11438952 (mtr)  LOC11439048 (mtr)  LOC11444186 (mtr)  LOC100191557 (zma)  LOC100217248 (zma)  LOC100244819 (vvi)  LOC100260088 (vvi)  LOC100262024 (vvi)  LOC100283410 (zma)  LOC100780525 (gma)  LOC100784684 (gma)  LOC100801041 (gma)  LOC100802701 (gma)  LOC100803512 (gma)  LOC100806852 (gma)  LOC100812303 (gma)  LOC100813326 (gma)  LOC101249460 (sly)  LOC101256241 (sly)  LOC101261404 (sly)  LOC103654010 (zma)  LOC103838030 (bra)  LOC103838393 (bra)  LOC103848193 (bra)  LOC103849001 (bra)  LOC103859248 (bra)  LOC103870628 (bra)  LOC103872030 (bra) 
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  chlo 1,  extr 1  (predict for NP_187445.1)
Subcellular
localization
TargetP
other 8  (predict for NP_187445.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04144 Endocytosis 2
Genes directly connected with SCN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 UBC22 ubiquitin-conjugating enzyme 22 [detail] 830390
5.5 MMZ3 MMS ZWEI homologue 3 [detail] 818179
5.2 AT5G14240 Thioredoxin superfamily protein [detail] 831274
Coexpressed
gene list		 [Coexpressed gene list for SCN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258637_at
258637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258637_at
258637_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258637_at
258637_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819979      
Refseq ID (protein) NP_187445.1 


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