[←][→] ath   AT3G13445 Gene
functional annotation
Function   TATA binding protein 1  
GO BP
GO:0006352 [list] [network] DNA-templated transcription, initiation  (56 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001030688.1  NP_187953.1 
BLAST NP_001030688.1  NP_187953.1 
Orthologous [Ortholog page] LOC542240 (zma)  LOC542241 (zma)  TBP1 (gma)  TBP2 (ath)  LOC4333619 (osa)  LOC4348699 (osa)  LOC4352633 (osa)  LOC7453590 (ppo)  LOC7489675 (ppo)  LOC25491712 (mtr)  LOC25498820 (mtr)  LOC100243302 (vvi)  LOC100790566 (gma)  LOC100804848 (gma)  LOC100810213 (gma)  LOC100810845 (gma)  LOC101254627 (sly)  LOC103829778 (bra)  LOC103832582 (bra)  LOC103870134 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  plas 1,  vacu 1,  chlo_mito 1  (predict for NP_001030688.1)
nucl 9  (predict for NP_187953.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001030688.1)
other 9  (predict for NP_187953.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
Genes directly connected with TBP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 TBP2 TATA binding protein 2 [detail] 841999
5.4 KIN11 SNF1 kinase homolog 11 [detail] 822566
5.0 AT2G16460 coiled-coil 90B-like protein (DUF1640) [detail] 816144
4.9 AT5G03220 Mediator complex, subunit Med7 [detail] 831902
4.7 AT3G50880 DNA glycosylase superfamily protein [detail] 824252
3.8 AT4G35840 RING/U-box superfamily protein [detail] 829738
Coexpressed
gene list		 [Coexpressed gene list for TBP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256961_at
256961_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256961_at
256961_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256961_at
256961_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820546      
Refseq ID (protein) NP_001030688.1 
NP_187953.1 


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