[←][→] ath   At1g55520 Gene
functional annotation
Function   TATA binding protein 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (26 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM TAS  
GO MF
GO:0017025 [list] [network] TBP-class protein binding  (7 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001321102.1  NP_001321103.1  NP_175948.1  NP_849812.1 
BLAST NP_001321102.1  NP_001321103.1  NP_175948.1  NP_849812.1 
Orthologous [Ortholog page] TBP1 (gma)  TBP1 (ath)  LOC4333619 (osa)  LOC4348699 (osa)  LOC4352633 (osa)  LOC7453590 (ppo)  LOC7489675 (ppo)  LOC25491712 (mtr)  LOC25498820 (mtr)  LOC100790566 (gma)  LOC100804848 (gma)  LOC100810213 (gma)  LOC100810845 (gma)  LOC101254627 (sly)  LOC103829778 (bra)  LOC103832582 (bra)  LOC103850628 (bra)  LOC103855680 (bra)  LOC103870134 (bra)  LOC123087351 (tae)  LOC123090582 (tae)  LOC123095622 (tae)  LOC123102038 (tae)  LOC123110157 (tae)  LOC123117809 (tae)  LOC123119191 (tae)  LOC123429269 (hvu)  LOC123446934 (hvu) 
Subcellular
localization
wolf
nucl 7,  golg 2  (predict for NP_001321102.1)
nucl 8,  cyto 2  (predict for NP_001321103.1)
nucl 8,  cyto 2  (predict for NP_175948.1)
nucl 8,  cyto 2  (predict for NP_849812.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001321102.1)
other 9  (predict for NP_001321103.1)
other 9  (predict for NP_175948.1)
other 9  (predict for NP_849812.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 3
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with TBP2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 TBP1 TATA binding protein 1 [detail] 820546
7.0 NF-YB12 nuclear factor Y, subunit B12 [detail] 830715
6.2 SYP81 syntaxin of plants 81 [detail] 841599
5.7 AT2G05590 TLD-domain containing nucleolar protein [detail] 815108
Coexpressed
gene list		 [Coexpressed gene list for TBP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265071_at
265071_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265071_at
265071_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265071_at
265071_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841999      
Refseq ID (protein) NP_001321102.1 
NP_001321103.1 
NP_175948.1 
NP_849812.1 


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