[←][→] ath   AT3G13580 Gene
functional annotation
Function   Ribosomal protein L30/L7 family protein  
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (13 genes)  IBA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (136 genes)  IBA IDA  
GO:0022626 [list] [network] cytosolic ribosome  (317 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_001326486.1  NP_001326487.1  NP_001326488.1  NP_001326489.1  NP_001326490.1  NP_001326491.1  NP_187967.1  NP_974304.1  NP_974305.1 
BLAST NP_001326486.1  NP_001326487.1  NP_001326488.1  NP_001326489.1  NP_001326490.1  NP_001326491.1  NP_187967.1  NP_974304.1  NP_974305.1 
Orthologous [Ortholog page] AT2G01250 (ath)  AT2G44120 (ath)  LOC4336914 (osa)  LOC4345009 (osa)  LOC7469477 (ppo)  LOC7485495 (ppo)  LOC7497794 (ppo)  LOC11440629 (mtr)  LOC25482160 (mtr)  LOC25491242 (mtr)  LOC100191368 (zma)  LOC100242794 (vvi)  LOC100245039 (vvi)  LOC100281870 (zma)  LOC100281971 (zma)  LOC100282330 (zma)  LOC100305682 (gma)  LOC100306213 (gma)  LOC100813342 (gma)  LOC101251486 (sly)  LOC101260624 (sly)  LOC101261844 (sly)  LOC103637734 (zma)  LOC103827596 (bra)  LOC103832784 (bra)  LOC103839500 (bra)  LOC103858117 (bra)  LOC103866124 (bra)  LOC104880426 (vvi) 
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for NP_001326486.1)
cyto 8,  nucl 1  (predict for NP_001326487.1)
cyto 8,  nucl 1  (predict for NP_001326488.1)
cyto 8,  nucl 1  (predict for NP_001326489.1)
cyto 8,  nucl 1  (predict for NP_001326490.1)
cyto 8,  nucl 1  (predict for NP_001326491.1)
cyto 8,  nucl 1  (predict for NP_187967.1)
cyto 8,  nucl 1  (predict for NP_974304.1)
cyto 8,  nucl 1  (predict for NP_974305.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001326486.1)
other 9  (predict for NP_001326487.1)
other 9  (predict for NP_001326488.1)
other 9  (predict for NP_001326489.1)
other 9  (predict for NP_001326490.1)
other 9  (predict for NP_001326491.1)
other 9  (predict for NP_187967.1)
other 9  (predict for NP_974304.1)
other 9  (predict for NP_974305.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
Genes directly connected with AT3G13580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 AT3G14600 Ribosomal protein L18ae/LX family protein [detail] 820688
9.8 AT5G23900 Ribosomal protein L13e family protein [detail] 832455
9.8 EMB3010 Ribosomal protein S6e [detail] 830900
9.6 AT4G02230 Ribosomal protein L19e family protein [detail] 828099
9.3 AT3G01790 Ribosomal protein L13 family protein [detail] 821078
8.5 AT5G09770 Ribosomal protein L17 family protein [detail] 830837
Coexpressed
gene list		 [Coexpressed gene list for AT3G13580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256648_at
256648_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256648_at
256648_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256648_at
256648_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820560      
Refseq ID (protein) NP_001326486.1 
NP_001326487.1 
NP_001326488.1 
NP_001326489.1 
NP_001326490.1 
NP_001326491.1 
NP_187967.1 
NP_974304.1 
NP_974305.1 


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