[←][→] ath   AT3G15390 Gene
functional annotation
Function   silencing defective 5  
GO BP
GO:0010267 [list] [network] production of ta-siRNAs involved in RNA interference  (15 genes)  TAS  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001189900.1  NP_001327652.1  NP_188158.4 
BLAST NP_001189900.1  NP_001327652.1  NP_188158.4 
Orthologous [Ortholog page] LOC4330105 (osa)  LOC7477411 (ppo)  LOC11421978 (mtr)  LOC100192866 (zma)  LOC100258824 (vvi)  LOC100808122 (gma)  LOC101252606 (sly)  LOC103840780 (bra)  LOC103869924 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  pero 1,  cyto_plas 1  (predict for NP_001189900.1)
mito 4,  chlo 3,  nucl 3  (predict for NP_001327652.1)
nucl 6,  chlo 1,  cyto 1  (predict for NP_188158.4)
Subcellular
localization
TargetP
other 8  (predict for NP_001189900.1)
mito 5  (predict for NP_001327652.1)
other 7  (predict for NP_188158.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath04626 Plant-pathogen interaction 2
Genes directly connected with SDE5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.0 AT4G24970 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [detail] 828599
4.9 XRCC4 DNA ligase IV-binding protein [detail] 821885
4.8 SAE1A SUMO-activating enzyme 1A [detail] 828596
Coexpressed
gene list		 [Coexpressed gene list for SDE5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258389_at
258389_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258389_at
258389_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258389_at
258389_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820778      
Refseq ID (protein) NP_001189900.1 
NP_001327652.1 
NP_188158.4 


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