[←][→] ath   AT3G15580 Gene
functional annotation
Function   Ubiquitin-like superfamily protein  
GO BP
GO:0006995 [list] [network] cellular response to nitrogen starvation  (33 genes)  IBA  
GO:0006914 [list] [network] autophagy  (55 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005775 [list] [network] vacuolar lumen  (5 genes)  NAS  
GO:0000421 [list] [network] autophagosome membrane  (13 genes)  IEA  
GO:0005874 [list] [network] microtubule  (186 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (748 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  NAS  
GO MF
GO:0019786 [list] [network] Atg8-specific protease activity  (2 genes)  ISS  
GO:0019779 [list] [network] Atg8 activating enzyme activity  (3 genes)  ISS  
GO:0019776 [list] [network] Atg8 ligase activity  (4 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_566518.1 
BLAST NP_566518.1 
Orthologous [Ortholog page] LOC7460490 (ppo)  LOC7485871 (ppo)  LOC7498225 (ppo)  LOC11424644 (mtr)  LOC11443804 (mtr)  LOC25499228 (mtr)  LOC100248696 (vvi)  ATG8i (gma)  LOC100527345 (gma)  LOC100736470 (sly)  LOC103869900 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cysk_nucl 1,  cysk 1  (predict for NP_566518.1)
Subcellular
localization
TargetP
other 9  (predict for NP_566518.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
Genes directly connected with APG8H on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 AT1G17080 Ribosomal protein L18ae family [detail] 838278
7.6 AT2G19350 transmembrane protein (DUF872) [detail] 816452
7.6 ATG8C Ubiquitin-like superfamily protein [detail] 842499
7.5 FIS1B Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 831114
7.5 APG8A Ubiquitin-like superfamily protein [detail] 828287
7.5 AT1G01725 adenylosuccinate synthetase [detail] 839271
7.5 ATG8F Ubiquitin-like superfamily protein [detail] 827351
6.9 ATG12A Ubiquitin-like superfamily protein [detail] 841861
6.7 CNX7 co-factor for nitrate, reductase and xanthine dehydrogenase 7 [detail] 826601
6.6 AT3G52105 DIS3-exonuclease-like protein [detail] 2745960
6.4 AT3G62560 Ras-related small GTP-binding family protein [detail] 825430
6.3 HVA22K HVA22-like protein K [detail] 829825
6.0 AT1G65000 F-box only protein [detail] 842808
5.6 AT2G39270 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 818512
Coexpressed
gene list		 [Coexpressed gene list for APG8H]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257293_at
257293_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257293_at
257293_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257293_at
257293_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 820798      
Refseq ID (protein) NP_566518.1 


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