[←][→] ath   AT3G22320 Gene
functional annotation
Function   Eukaryotic rpb5 RNA polymerase subunit family protein  
GO BP
GO CC
GO:0000418 [list] [network] RNA polymerase IV complex  (15 genes)  IDA IPI  
GO:0005736 [list] [network] RNA polymerase I complex  (17 genes)  IBA  
GO:0005665 [list] [network] RNA polymerase II, core complex  (22 genes)  IBA IDA IPI  
GO:0005666 [list] [network] RNA polymerase III complex  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001055 [list] [network] RNA polymerase II activity  (19 genes)  IBA  
GO:0001054 [list] [network] RNA polymerase I activity  (20 genes)  IBA  
GO:0001056 [list] [network] RNA polymerase III activity  (24 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_188871.1 
BLAST NP_188871.1 
Orthologous [Ortholog page] LOC4327549 (osa)  LOC9270850 (osa)  LOC11407830 (mtr)  LOC11438657 (mtr)  LOC100193880 (zma)  LOC100259318 (vvi)  LOC100273250 (zma)  LOC100306098 (gma)  LOC100499667 (gma)  LOC101249921 (sly)  LOC103859952 (bra)  LOC103869090 (bra) 
Subcellular
localization
wolf
cyto 5,  pero 2,  nucl 1,  chlo 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_188871.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for NP_188871.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03020 RNA polymerase 3
Genes directly connected with NRPB5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT2G44860 Ribosomal protein L24e family protein [detail] 819095
7.4 AT1G75670 DNA-directed RNA polymerase [detail] 843901
6.8 AT3G58180 ARM repeat superfamily protein [detail] 824987
6.3 AT2G19080 metaxin-like protein [detail] 816425
6.2 CKB1 casein kinase II beta chain 1 [detail] 834754
Coexpressed
gene list		 [Coexpressed gene list for NRPB5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258453_at
258453_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258453_at
258453_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258453_at
258453_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821801      
Refseq ID (protein) NP_188871.1 


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