[←][→] ath   AT3G22980 Gene
functional annotation
Function   Ribosomal protein S5/Elongation factor G/III/V family protein  
GO BP
GO:0042256 [list] [network] mature ribosome assembly  (3 genes)  IBA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0043022 [list] [network] ribosome binding  (43 genes)  IBA  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IBA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_001319621.1  NP_001327177.1  NP_188938.1 
BLAST NP_001319621.1  NP_001327177.1  NP_188938.1 
Orthologous [Ortholog page] LOC4333588 (osa)  LOC11417702 (mtr)  LOC100248167 (vvi)  LOC101258526 (sly)  LOC103643809 (zma)  LOC103868951 (bra) 
Subcellular
localization
wolf
cyto 3,  nucl 2,  cyto_plas 2,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001319621.1)
cyto 3,  nucl 2,  cyto_plas 2,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001327177.1)
cyto 3,  nucl 2,  cyto_plas 2,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_188938.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001319621.1)
other 8  (predict for NP_001327177.1)
other 8  (predict for NP_188938.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with AT3G22980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 EMB2770 pre-mRNA splicing factor-like protein [detail] 827925
7.1 NBP35 nucleotide binding protein 35 [detail] 835169
7.0 AT2G47330 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 819346
5.1 PHYD phytochrome D [detail] 827319
Coexpressed
gene list		 [Coexpressed gene list for AT3G22980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257758_at
257758_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257758_at
257758_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257758_at
257758_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821872      
Refseq ID (protein) NP_001319621.1 
NP_001327177.1 
NP_188938.1 


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