[←][→] ath   AT3G25940 Gene
functional annotation
Function   TFIIB zinc-binding protein  
GO BP
GO:0006363 [list] [network] termination of RNA polymerase I transcription  (1 genes)  IBA  
GO:0006379 [list] [network] mRNA cleavage  (11 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (17 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001054 [list] [network] RNA polymerase I activity  (20 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_566786.1 
BLAST NP_566786.1 
Orthologous [Ortholog page] LOC4333888 (osa)  LOC7481723 (ppo)  LOC11424547 (mtr)  LOC100527489 (gma)  LOC100784235 (gma)  LOC100853901 (vvi)  LOC101268675 (sly)  LOC103643893 (zma)  LOC103829455 (bra)  LOC103872808 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_566786.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for NP_566786.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT3G25940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 AT3G52040 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [detail] 824367
9.2 AT1G75670 DNA-directed RNA polymerase [detail] 843901
9.0 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 [detail] 835314
6.7 ELP6 elongator protein 6 [detail] 826600
6.7 AT5G09380 RNA polymerase III RPC4 [detail] 830797
6.4 AT1G75980 Single hybrid motif superfamily protein [detail] 843930
Coexpressed
gene list		 [Coexpressed gene list for AT3G25940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258079_at
258079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258079_at
258079_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258079_at
258079_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822191      
Refseq ID (protein) NP_566786.1 


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