[←][→] ath   AT3G29200 Gene
functional annotation
Function   chorismate mutase 1  
GO BP
GO:0046417 [list] [network] chorismate metabolic process  (14 genes)  IEA  
GO:0098869 [list] [network] cellular oxidant detoxification  (26 genes)  ISS  
GO:0009073 [list] [network] aromatic amino acid family biosynthetic process  (59 genes)  IBA IDA TAS  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  ISS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  TAS  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  TAS  
GO MF
GO:0004106 [list] [network] chorismate mutase activity  (3 genes)  IBA IDA IGI  
GO:0016688 [list] [network] L-ascorbate peroxidase activity  (9 genes)  ISS  
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_566846.1 
BLAST NP_566846.1 
Orthologous [Ortholog page] CM3 (ath)  LOC4326889 (osa)  LOC7492903 (ppo)  LOC11412814 (mtr)  LOC25495318 (mtr)  LOC100263367 (vvi)  LOC100266283 (vvi)  LOC100272431 (zma)  LOC100279511 (zma)  LOC100780534 (gma)  LOC100793028 (gma)  LOC100793500 (gma)  LOC100797299 (gma)  LOC101243843 (sly)  LOC103636619 (zma)  LOC103830932 (bra)  LOC103831335 (bra)  LOC103837205 (bra)  LOC103875095 (bra) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for NP_566846.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_566846.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 12
ath01230 Biosynthesis of amino acids 6
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
Genes directly connected with CM1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 ATCAD4 GroES-like zinc-binding alcohol dehydrogenase family protein [detail] 821479
8.6 C4H cinnamate-4-hydroxylase [detail] 817599
7.6 PAL1 PHE ammonia lyase 1 [detail] 818280
5.1 PD1 prephenate dehydratase 1 [detail] 817329
Coexpressed
gene list		 [Coexpressed gene list for CM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257746_at
257746_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257746_at
257746_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257746_at
257746_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822573      
Refseq ID (protein) NP_566846.1 


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