[←][→] ath   AT3G42830 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0045116 [list] [network] protein neddylation  (9 genes)  IBA  
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0031462 [list] [network] Cul2-RING ubiquitin ligase complex  (1 genes)  IBA  
GO:0031467 [list] [network] Cul7-RING ubiquitin ligase complex  (1 genes)  IBA  
GO:0043224 [list] [network] nuclear SCF ubiquitin ligase complex  (2 genes)  IBA  
GO:0031463 [list] [network] Cul3-RING ubiquitin ligase complex  (4 genes)  IBA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IBA  
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (212 genes)  IBA  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0019788 [list] [network] NEDD8 transferase activity  (3 genes)  IBA  
GO:0097602 [list] [network] cullin family protein binding  (25 genes)  IBA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  TAS  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_189869.1 
BLAST NP_189869.1 
Orthologous [Ortholog page] LOC4326152 (osa)  LOC4330476 (osa)  LOC7471662 (ppo)  LOC11413962 (mtr)  LOC25492127 (mtr)  LOC100192928 (zma)  LOC100246271 (vvi)  LOC100259489 (vvi)  LOC100500045 (gma)  LOC100789570 (gma)  LOC100798515 (gma)  LOC101249890 (sly)  LOC101259644 (sly)  LOC103634739 (zma)  LOC103649912 (zma)  LOC103845664 (bra)  LOC103851357 (bra)  LOC103856451 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_189869.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_189869.1)
Gene coexpression
Network*for
coexpressed
genes
Coexpressed
gene list		 [Coexpressed gene list for AT3G42830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252767_at
252767_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252767_at
252767_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252767_at
252767_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823327      
Refseq ID (protein) NP_189869.1 


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