[←][→] ath   AT3G48780 Gene
functional annotation
Function   serine palmitoyltransferase 1  
GO BP
GO:0030148 [list] [network] sphingolipid biosynthetic process  (31 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004758 [list] [network] serine C-palmitoyltransferase activity  (3 genes)  IGI  
GO:0030170 [list] [network] pyridoxal phosphate binding  (84 genes)  IEA  
KEGG ath00600 [list] [network] Sphingolipid metabolism (27 genes)
Protein NP_001325849.1  NP_190447.1 
BLAST NP_001325849.1  NP_190447.1 
Orthologous [Ortholog page] LOC732780 (zma)  LCB2 (ath)  LOC4326964 (osa)  LOC4326965 (osa)  LOC4326966 (osa)  LOC4350591 (osa)  LOC7454589 (ppo)  LOC7486392 (ppo)  LOC25495905 (mtr)  LOC100249169 (vvi)  LOC100249818 (vvi)  LOC100282573 (zma)  LOC100285632 (zma)  LOC100789635 (gma)  LOC100803194 (gma)  LOC101246439 (sly)  LOC101254177 (sly)  LOC103652945 (zma)  LCB2 (bra)  LOC103874866 (bra) 
Subcellular
localization
wolf
chlo 4,  vacu 3,  E.R. 2,  nucl 1,  extr 1  (predict for NP_001325849.1)
chlo 4,  vacu 3,  E.R. 2,  nucl 1,  extr 1  (predict for NP_190447.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_001325849.1)
scret 7  (predict for NP_190447.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SPT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 SK32 shaggy-like protein kinase 32 [detail] 828023
6.2 KEU Sec1/munc18-like (SM) proteins superfamily [detail] 837791
6.2 VAP27-1 vesicle associated protein [detail] 825231
Coexpressed
gene list		 [Coexpressed gene list for SPT1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824039      
Refseq ID (protein) NP_001325849.1 
NP_190447.1 


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