[←][→] ath   AT3G50080 Gene
functional annotation
Function   VIER F-box protein 2  
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA TAS  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA ISS  
KEGG
Protein NP_566928.1 
BLAST NP_566928.1 
Orthologous [Ortholog page] VFB3 (ath)  SKIP2 (ath)  VFB1 (ath)  LOC4346401 (osa)  LOC7472683 (ppo)  LOC7476400 (ppo)  LOC11420387 (mtr)  LOC100250708 (vvi)  LOC100259063 (vvi)  LOC100284044 (zma)  LOC100779319 (gma)  LOC100788163 (gma)  LOC100802150 (gma)  LOC100806231 (gma)  LOC100807711 (gma)  LOC100817022 (gma)  LOC101245757 (sly)  LOC101246998 (sly)  LOC101247773 (sly)  LOC103632351 (zma)  LOC103827866 (bra)  LOC103829524 (bra)  LOC103837742 (bra)  LOC103868721 (bra) 
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 2,  nucl 1  (predict for NP_566928.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566928.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VFB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 AT2G17030 F-box SKIP23-like protein (DUF295) [detail] 816206
8.4 AT1G55460 DNA/RNA-binding protein Kin17, conserved region [detail] 841993
8.1 AT5G28040 DNA-binding storekeeper protein-related transcriptional regulator [detail] 832874
8.0 AT3G20170 ARM repeat superfamily protein [detail] 821561
7.2 AT5G60820 RING/U-box superfamily protein [detail] 836203
7.2 AT5G27460 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 832805
6.8 SKIP2 SKP1/ASK1-interacting protein 2 [detail] 836860
6.7 AT5G08139 RING/U-box superfamily protein [detail] 830709
6.2 AT5G15820 RING/U-box superfamily protein [detail] 831439
6.2 FBX2 F-box protein 2 [detail] 832228
Coexpressed
gene list		 [Coexpressed gene list for VFB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252242_at
252242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252242_at
252242_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252242_at
252242_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824170      
Refseq ID (protein) NP_566928.1 


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