[←][→] ath   AT4G07400 Gene
functional annotation
Function   VIER F-box protein 3  
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  ISS  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA ISS  
KEGG
Protein NP_567316.1 
BLAST NP_567316.1 
Orthologous [Ortholog page] VFB2 (ath)  SKIP2 (ath)  VFB1 (ath)  LOC4346401 (osa)  LOC7472683 (ppo)  LOC7476400 (ppo)  LOC11420387 (mtr)  LOC100250708 (vvi)  LOC100259063 (vvi)  LOC100284044 (zma)  LOC100779319 (gma)  LOC100788163 (gma)  LOC100802150 (gma)  LOC100806231 (gma)  LOC100807711 (gma)  LOC100817022 (gma)  LOC101245757 (sly)  LOC101246998 (sly)  LOC101247773 (sly)  LOC103632351 (zma)  LOC103827866 (bra)  LOC103829524 (bra)  LOC103837742 (bra)  LOC103868721 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 5,  cyto 3  (predict for NP_567316.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_567316.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
Genes directly connected with VFB3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 RMV1 Amino acid permease family protein [detail] 830446
4.4 CRR22 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837671
4.3 AT1G80630 RNI-like superfamily protein [detail] 844402
Coexpressed
gene list		 [Coexpressed gene list for VFB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255193_at
255193_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255193_at
255193_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255193_at
255193_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826171      
Refseq ID (protein) NP_567316.1 


The preparation time of this page was 0.2 [sec].