[←][→] ath   AT3G52250 Gene
functional annotation
Function   Duplicated homeodomain-like superfamily protein  
GO BP
GO:2000617 [list] [network] positive regulation of histone H3-K9 acetylation  (1 genes)  IMP  
GO:1990619 [list] [network] histone H3-K9 deacetylation  (2 genes)  IMP  
GO:0010582 [list] [network] floral meristem determinacy  (20 genes)  IGI  
GO:1900055 [list] [network] regulation of leaf senescence  (36 genes)  IMP  
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (45 genes)  IDA  
GO:0008380 [list] [network] RNA splicing  (272 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001327905.1  NP_190793.2 
BLAST NP_001327905.1  NP_190793.2 
Orthologous [Ortholog page] LOC7468404 (ppo)  LOC9268524 (osa)  LOC11405402 (mtr)  LOC25495914 (mtr)  LOC100240985 (vvi)  LOC100279451 (zma)  LOC100384382 (zma)  LOC100806246 (gma)  LOC100810588 (gma)  LOC101263808 (sly)  LOC103841164 (bra)  LOC103860750 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001327905.1)
nucl 9  (predict for NP_190793.2)
Subcellular
localization
TargetP
other 4  (predict for NP_001327905.1)
other 4  (predict for NP_190793.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT3G52250 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.3 CCT RNA polymerase II transcription mediator [detail] 827954
12.7 SDG2 SET domain protein 2 [detail] 827183
11.9 LDL3 LSD1-like 3 [detail] 827325
10.7 MBD9 methyl-CPG-binding domain 9 [detail] 821132
9.8 AT4G29790 serine/arginine repetitive matrix protein [detail] 829101
9.2 SPA2 SPA1-related 2 [detail] 826712
8.6 AT4G24200 Transcription elongation factor (TFIIS) family protein [detail] 828521
8.4 AT4G39420 spatacsin carboxy-terminus protein [detail] 830097
8.2 AT5G49430 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein [detail] 835003
8.0 DDB1A damaged DNA binding protein 1A [detail] 825890
7.9 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [detail] 822392
7.4 AT3G22270 Topoisomerase II-associated protein PAT1 [detail] 821797
6.8 SHM6 serine hydroxymethyltransferase 6 [detail] 838807
6.8 AT5G52530 dentin sialophosphoprotein-like protein [detail] 835329
6.7 AT1G17450 B-block binding subunit of TFIIIC [detail] 838317
6.0 PHYC phytochrome C [detail] 833570
5.9 AT1G04390 BTB/POZ domain-containing protein [detail] 839530
5.9 AT1G13940 T-box transcription factor, putative (DUF863) [detail] 837954
5.6 SCL14 SCARECROW-like 14 [detail] 837267
4.9 JMJ18 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [detail] 839963
Coexpressed
gene list		 [Coexpressed gene list for AT3G52250]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824390      
Refseq ID (protein) NP_001327905.1 
NP_190793.2 


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