[←][→] ath   AT3G53580 Gene
functional annotation
Function   diaminopimelate epimerase family protein  
GO BP
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (15 genes)  IBA IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0008837 [list] [network] diaminopimelate epimerase activity  (1 genes)  IBA IGI  
KEGG ath00300 [list] [network] Lysine biosynthesis (15 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_190926.1 
BLAST NP_190926.1 
Orthologous [Ortholog page] LOC4352558 (osa)  LOC25499307 (mtr)  LOC100191234 (zma)  LOC100241380 (vvi)  LOC100273435 (zma)  LOC100784731 (gma)  LOC100807528 (gma)  LOC101246955 (sly)  LOC103829942 (bra)  LOC103841284 (bra)  LOC103867199 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  vacu 1,  chlo_mito 1  (predict for NP_190926.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_190926.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 11
ath00300 Lysine biosynthesis 5
ath01210 2-Oxocarboxylic acid metabolism 3
ath00230 Purine metabolism 2
ath00670 One carbon pool by folate 2
Genes directly connected with AT3G53580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 AT-HF HIS HF [detail] 828797
6.9 ADSS adenylosuccinate synthase [detail] 824930
6.4 EMB1923 embryo defective 1923 [detail] 828936
Coexpressed
gene list		 [Coexpressed gene list for AT3G53580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251948_at
251948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251948_at
251948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251948_at
251948_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824526      
Refseq ID (protein) NP_190926.1 


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